RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 GUF1Q8N442 669 aaKnown RBP20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 DEPTORQ8TB45 409 aa20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 DHX38Q92620 1227 aaKnown RBP20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 TSPY26PQ9H489 355 aa20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 NOD1Q9Y239 953 aa20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 ATP11BQ9Y2G3 1177 aa20.83■□□□□ 0.93
TNFRSF1A-213ENST00000540022 A0A087WZ62 844 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 DENND3A2RUS2 1198 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 EIF3DO15371 548 aaKnown RBP eCLIP20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 GPR32O75388 356 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 HOXD13P35453 343 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 GTF2BQ00403 316 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 TLE2Q04725 743 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 PTK7Q13308 1070 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 KIZQ2M2Z5 673 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 C1orf53Q5VUE5 145 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CDCA2Q69YH5 1023 aaPredicted RBP20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 KLHL10Q6JEL2 608 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 NME8Q8N427 588 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 SLC17A8Q8NDX2 589 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 ZNF507Q8TCN5 953 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 GDF15Q99988 308 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 FDXACB1Q9BRP7 624 aaPredicted RBP20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 ADAMTS10Q9H324 1103 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 IFT122Q9HBG6 1241 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 PCDHB13Q9Y5F0 798 aa20.83■□□□□ 0.92
TNFRSF1A-213ENST00000540022 SLC34A2O95436 690 aa20.82■□□□□ 0.92
TNFRSF1A-213ENST00000540022 PTENP60484 403 aa20.82■□□□□ 0.92
TNFRSF1A-213ENST00000540022 POU5F1BQ06416 359 aa20.82■□□□□ 0.92
TNFRSF1A-213ENST00000540022 ALCAMQ13740 583 aa20.82■□□□□ 0.92
TNFRSF1A-213ENST00000540022 BMT2Q1RMZ1 405 aa20.82■□□□□ 0.92
TNFRSF1A-213ENST00000540022 TAS1R3Q7RTX0 852 aa20.82■□□□□ 0.92
TNFRSF1A-213ENST00000540022 RPAINQ86UA6 219 aa20.82■□□□□ 0.92
TNFRSF1A-213ENST00000540022 GAS2L3Q86XJ1 694 aa20.82■□□□□ 0.92
TNFRSF1A-213ENST00000540022 NELFCDQ8IXH7 590 aa20.82■□□□□ 0.92
TNFRSF1A-213ENST00000540022 KCNN1Q92952 543 aa20.82■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CDHR5Q9HBB8 845 aa20.82■□□□□ 0.92
TNFRSF1A-213ENST00000540022 H0YCG3 227 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CD4P01730 458 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 STIM1Q13586 685 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 TRIM71Q2Q1W2 868 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 STXBP4Q6ZWJ1 553 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 ANKRD33Q7Z3H0 272 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 ZNF410Q86VK4 478 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 NLRP7Q8WX94 980 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 MED15Q96RN5 788 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 IKZF4Q9H2S9 585 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 DACH1Q9UI36 760 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 TBX20Q9UMR3 447 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 GINS2Q9Y248 185 aa20.81■□□□□ 0.92
TNFRSF1A-213ENST00000540022 PPP1R2P41236 205 aa20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 PHKA2P46019 1235 aa20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 FXR1P51114 621 aaKnown RBP eCLIP20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CDC42EP1Q00587 391 aa20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 FAAP100Q0VG06 881 aa20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 L1TD1Q5T7N2 865 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 RSPH3Q86UC2 560 aa20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 IFNLR1Q8IU57 520 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 ZBTB8OSQ8IWT0 167 aa20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 DHTKD1Q96HY7 919 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 SCLT1Q96NL6 688 aa20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 NFKBIZQ9BYH8 718 aa20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 TMEM134Q9H6X4 195 aa20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 MINDY3Q9H8M7 445 aa20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CTNND2Q9UQB3 1225 aa20.8■□□□□ 0.92
TNFRSF1A-213ENST00000540022 K7ERI5 159 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 PSMA7O14818 248 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 KIF20AO95235 890 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 ERCC5P28715 1186 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 MAGEA10P43363 369 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 ZNF165P49910 485 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 PMS1P54277 932 aaKnown RBP20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 STX17P56962 302 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 MRPS6P82932 125 aaKnown RBP20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 PAK1Q13153 545 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 KNOP1Q1ED39 458 aaKnown RBP20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 MAP4K3Q8IVH8 894 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 NELFBQ8WX92 580 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 HVCN1Q96D96 273 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 OSMRQ99650 979 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CCDC113Q9H0I3 377 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 C2orf40Q9H1Z8 148 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 KCTD10Q9H3F6 313 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 SEMA6BQ9H3T3 888 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 ZMYM2Q9UBW7 1377 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 UBE4BO95155 1302 aa20.79■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CSDE1O75534 798 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 RPLP2P05387 115 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CTSHP09668 335 aa20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CCNE1P24864 410 aa20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 THPOP40225 353 aa20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 EFNA5P52803 228 aa20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 MBTD1Q05BQ5 628 aa20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CT47A1Q5JQC4 288 aaPredicted RBP20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CENPPQ6IPU0 288 aa20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 P2RX5Q93086 422 aa20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 ACCSQ96QU6 501 aa20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CELF4Q9BZC1 486 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 CDY2AQ9Y6F7 541 aa20.78■□□□□ 0.92
TNFRSF1A-213ENST00000540022 MROH7Q68CQ1 1323 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms