RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ARL1P40616 181 aaPredicted RBP10.77□□□□□ -0.69
TRAF1-202ENST00000540010 SULF1Q8IWU6 871 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 RNF10Q8N5U6 811 aaKnown RBP10.77□□□□□ -0.69
TRAF1-202ENST00000540010 LRRN4CLQ8ND94 238 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 TRPM4Q8TD43 1214 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 DCPSQ96C86 337 aaKnown RBP10.77□□□□□ -0.69
TRAF1-202ENST00000540010 TEPSINQ96N21 525 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 MBOAT7Q96N66 472 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 REEP2Q9BRK0 252 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 WDR18Q9BV38 432 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 SMARCAL1Q9NZC9 954 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 PPP1R9AQ9ULJ8 1098 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 ZNF148Q9UQR1 794 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 EML1O00423 815 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 FGGP02679 453 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 HOXA7P31268 230 aaPredicted RBP10.77□□□□□ -0.69
TRAF1-202ENST00000540010 TRPC3Q13507 836 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 PPP2R5EQ16537 467 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 CFAP157Q5JU67 520 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 FAM102BQ5T8I3 360 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 REXO1L1PQ8IX06 675 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 BANK1Q8NDB2 785 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 SPATA4Q8NEY3 305 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 KLHL29Q96CT2 875 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 DNAJC19Q96DA6 116 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 THOC1Q96FV9 657 aaKnown RBP10.77□□□□□ -0.69
TRAF1-202ENST00000540010 NACC1Q96RE7 527 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 RMDN3Q96TC7 470 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 FMO2Q99518 471 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 RNF146Q9NTX7 359 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 PNMA2Q9UL42 364 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 BZW2Q9Y6E2 419 aaKnown RBP10.77□□□□□ -0.69
TRAF1-202ENST00000540010 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.77□□□□□ -0.69
TRAF1-202ENST00000540010 EYA4O95677 639 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 PTGER2P43116 358 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 BACE1P56817 501 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 TSNAXIP1Q2TAA8 658 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 HYIQ5T013 277 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 BSPRYQ5W0U4 402 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 SNRNP48Q6IEG0 339 aaKnown RBP10.77□□□□□ -0.69
TRAF1-202ENST00000540010 CCDC62Q6P9F0 684 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 SRLQ86TD4 932 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 SYT2Q8N9I0 419 aaPredicted RBP10.77□□□□□ -0.69
TRAF1-202ENST00000540010 LENG9Q96B70 501 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 MXRA8Q9BRK3 442 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 RNF181Q9P0P0 153 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 RNF14Q9UBS8 474 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 SNX24Q9Y343 169 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 A0A1W2PQC6 194 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 TXNDC9O14530 226 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 MTMR1Q13613 665 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 TBC1D1Q86TI0 1168 aaPredicted RBP10.76□□□□□ -0.69
TRAF1-202ENST00000540010 PROCA1Q8NCQ7 364 aaPredicted RBP10.76□□□□□ -0.69
TRAF1-202ENST00000540010 RILPQ96NA2 401 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 POLR3CQ9BUI4 534 aaPredicted RBP10.76□□□□□ -0.69
TRAF1-202ENST00000540010 GPRC5DQ9NZD1 345 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 EXOC7Q9UPT5 735 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 CSADQ9Y600 493 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 KRT19P08727 400 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 RPS6P62753 249 aaKnown RBP10.76□□□□□ -0.69
TRAF1-202ENST00000540010 GUCY1A3Q02108 690 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 STRN3Q13033 797 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 L2HGDHQ9H9P8 463 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 MLXIPLQ9NP71 852 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 FERP16591 822 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 PBX1P40424 430 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 PSMC4P43686 418 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 ACTN3Q08043 901 aaPredicted RBP10.76□□□□□ -0.69
TRAF1-202ENST00000540010 CASC4Q6P4E1 433 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 MMS22LQ6ZRQ5 1243 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 OTOP1Q7RTM1 612 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 CCDC89Q8N998 374 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 WHAMMQ8TF30 809 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 ELAC2Q9BQ52 826 aaKnown RBP10.76□□□□□ -0.69
TRAF1-202ENST00000540010 TUFT1Q9NNX1 390 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 FAM114A2Q9NRY5 505 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 LTBP3Q9NS15 1303 aa10.76□□□□□ -0.69
TRAF1-202ENST00000540010 MYO1FO00160 1098 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 SUN1O94901 812 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 KLK7P49862 253 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 SLC12A3P55017 1021 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 XKR9Q5GH70 373 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 MUM1L1Q5H9M0 696 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 TEX2Q8IWB9 1127 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 SREK1Q8WXA9 508 aaKnown RBP10.75□□□□□ -0.69
TRAF1-202ENST00000540010 MS4A14Q96JA4 679 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 LXNQ9BS40 222 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 SLC38A10Q9HBR0 1119 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 PITPNM2Q9BZ72 1349 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 ANO9A1A5B4 782 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 ACSL3O95573 720 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 SPATA31C1P0DKV0 1188 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 PTPRAP18433 802 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 SLC8A1P32418 973 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 SDCCAG8Q86SQ7 713 aaPredicted RBP10.75□□□□□ -0.69
TRAF1-202ENST00000540010 ZNF354CQ86Y25 554 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 GPC2Q8N158 579 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 CCDC110Q8TBZ0 833 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 TAAR1Q96RJ0 339 aa10.75□□□□□ -0.69
TRAF1-202ENST00000540010 UNC45AQ9H3U1 944 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms