RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 TEX33O43247 280 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 TSPAN1O60635 241 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 CNOT3O75175 753 aaKnown RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 TRPA1O75762 1119 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 FKBP9O95302 570 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 CTDNEP1O95476 244 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 CYP1A1P04798 512 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 GLI1P08151 1106 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 FAM153BP0C7A2 387 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 PYGMP11217 842 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 GNAT2P19087 354 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 KRT2P35908 639 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 CCNFP41002 786 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 ETV3P41162 512 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 PPP1R2P41236 205 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 EPS15P42566 896 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 BCAP31P51572 246 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 COPB1P53618 953 aaKnown RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 POLGP54098 1239 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 SLC18A1P54219 525 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 DRG2P55039 364 aaKnown RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 NUP107P57740 925 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 POU5F1Q01860 360 aaKnown RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 GRIN1Q05586 938 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 ASPHQ12797 758 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 IKQ13123 557 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 PNOCQ13519 176 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 E2F2Q14209 437 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 NR1D2Q14995 579 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 TTF1Q15361 905 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 MTFR1Q15390 333 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 FAM153CQ494X1 144 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 KAZNQ674X7 775 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 OLFML2BQ68BL8 750 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 TWF2Q6IBS0 349 aaKnown RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 AAGABQ6PD74 315 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 TUBA3EQ6PEY2 450 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 SHC4Q6S5L8 630 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 C4orf50Q6ZRC1 276 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 PRR23CQ6ZRP0 262 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 TRIM67Q6ZTA4 783 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 C3orf67Q6ZVT6 689 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 NEK10Q6ZWH5 1172 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 HS2ST1Q7LGA3 356 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 RIBC1Q8N443 379 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 ABTB1Q969K4 478 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 CFAP57Q96MR6 1250 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 PRICKLE1Q96MT3 831 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 NOX5Q96PH1 765 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 IFIH1Q9BYX4 1025 aaKnown RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 NUF2Q9BZD4 464 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 CRNKL1Q9BZJ0 848 aaKnown RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 TTYH3Q9C0H2 523 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 RSPH9Q9H1X1 276 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 ADAM7Q9H2U9 754 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 C10orf88Q9H8K7 445 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 AS3MTQ9HBK9 375 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 MOV10Q9HCE1 1003 aaKnown RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 VTA1Q9NP79 307 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 RBM12Q9NTZ6 932 aaKnown RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 TBC1D23Q9NUY8 699 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 FAM153AQ9UHL3 310 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 RWDD2AQ9UIY3 292 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 STARD13Q9Y3M8 1113 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 ACTL7BQ9Y614 415 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 MYH7P12883 1935 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 DDX60Q8IY21 1712 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 ABCB11O95342 1321 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 A0A0U1RQJ8 604 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 SSU72P8A0A1W2PR75 194 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 GOLGA8BA8MQT2 603 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 A8MUI8 341 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 FADS2P1A8MWK0 482 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 RASA4BC9J798 803 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 H3BNX3 289 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 H7C1D1 291 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 RBAK-RBAKDNI3L0D1 243 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 APBB1O00213 710 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 GNPATO15228 680 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 MAPK13O15264 365 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 TEX28O15482 410 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 RASA4O43374 803 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 PEX1O43933 1283 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 PDE8AO60658 829 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 SRGAP2O75044 1071 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 PHF2O75151 1096 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 OXSR1O95747 527 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 BMP15O95972 392 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 GAS8O95995 478 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 APOEP02649 317 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 GM2AP17900 193 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 ENPP1P22413 925 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 MARCKSP29966 332 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 GNA11P29992 359 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 ATICP31939 592 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 DNM2P50570 870 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 THOP1P52888 689 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 ARFIP2P53365 341 aa6.56□□□□□ -1.36
SNHG1-211ENST00000539921 EXOSC10Q01780 885 aaKnown RBP6.56□□□□□ -1.36
SNHG1-211ENST00000539921 CDR2Q01850 454 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms