RNA–Protein interactions for RNA: ENST00000539856.5

CWC15-202, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 2

Gene CWC15, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-202ENST00000539856 CA3P07451 260 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 STAG3L1P0CL83 205 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 CYP11B2P19099 503 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 SFPQP23246 707 aaKnown RBP eCLIP11.33□□□□□ -0.6
CWC15-202ENST00000539856 ARL2P36404 184 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 LONP1P36776 959 aaKnown RBP11.33□□□□□ -0.6
CWC15-202ENST00000539856 TFDP1Q14186 410 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 PTPAQ15257 358 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 FOXD4L5Q5VV16 416 aaPredicted RBP11.33□□□□□ -0.6
CWC15-202ENST00000539856 PPP2R2DQ66LE6 453 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 MAEAQ7L5Y9 396 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 SRGAP1Q7Z6B7 1085 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 CABP7Q86V35 215 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 FOXD4L4Q8WXT5 416 aaPredicted RBP11.33□□□□□ -0.6
CWC15-202ENST00000539856 CALML4Q96GE6 196 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 USP28Q96RU2 1077 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 ADAM2Q99965 735 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 MMTAG2Q9BU76 263 aaKnown RBP11.33□□□□□ -0.6
CWC15-202ENST00000539856 BHMT2Q9H2M3 363 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 TTYH1Q9H313 450 aaPredicted RBP11.33□□□□□ -0.6
CWC15-202ENST00000539856 TMX1Q9H3N1 280 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 CHST12Q9NRB3 414 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 RGS18Q9NS28 235 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 C1orf112Q9NSG2 853 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 MTMR10Q9NXD2 777 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 LRFN2Q9ULH4 789 aa11.33□□□□□ -0.6
CWC15-202ENST00000539856 RANBP2P49792 3224 aaKnown RBP11.32□□□□□ -0.6
CWC15-202ENST00000539856 HRO43593 1189 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 F13A1P00488 732 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 MARCKSP29966 332 aaPredicted RBP11.32□□□□□ -0.6
CWC15-202ENST00000539856 HTRA4P83105 476 aaPredicted RBP11.32□□□□□ -0.6
CWC15-202ENST00000539856 POU5F1BQ06416 359 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 SLC39A14Q15043 492 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 STK38Q15208 465 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 HYIQ5T013 277 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 FAM102BQ5T8I3 360 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 SLC24A5Q71RS6 500 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 CATSPER4Q7RTX7 472 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 RNF149Q8NC42 400 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 LINC01599Q8WXQ3 324 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 PNMA5Q96PV4 448 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 YME1L1Q96TA2 773 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 POLR3FQ9H1D9 316 aaPredicted RBP11.32□□□□□ -0.6
CWC15-202ENST00000539856 IFT122Q9HBG6 1241 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 TFIP11Q9UBB9 837 aaKnown RBP11.32□□□□□ -0.6
CWC15-202ENST00000539856 PCDHB7Q9Y5E2 793 aa11.32□□□□□ -0.6
CWC15-202ENST00000539856 SRPRBQ9Y5M8 271 aaKnown RBP11.32□□□□□ -0.6
CWC15-202ENST00000539856 BHMG1C9JSJ3 638 aaPredicted RBP11.31□□□□□ -0.6
CWC15-202ENST00000539856 MGEA5O60502 916 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 CSDE1O75534 798 aaKnown RBP11.31□□□□□ -0.6
CWC15-202ENST00000539856 IBSPP21815 317 aaPredicted RBP11.31□□□□□ -0.6
CWC15-202ENST00000539856 FGFR4P22455 802 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 GLRA2P23416 452 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 PHKA2P46019 1235 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 SARSP49591 514 aaKnown RBP11.31□□□□□ -0.6
CWC15-202ENST00000539856 PTENP60484 403 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 FAM189BP81408 668 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 DSC3Q14574 896 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 GRIN2CQ14957 1233 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 PCBP1Q15365 356 aaKnown RBP eCLIP11.31□□□□□ -0.6
CWC15-202ENST00000539856 NPAS4Q8IUM7 802 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 RASSF8Q8NHQ8 419 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 ASAP3Q8TDY4 903 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 PLIN2Q99541 437 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 CSRNP2Q9H175 543 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 DACT1Q9NYF0 836 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 CCDC39Q9UFE4 941 aa11.31□□□□□ -0.6
CWC15-202ENST00000539856 MORC2Q9Y6X9 1032 aaPredicted RBP11.31□□□□□ -0.6
CWC15-202ENST00000539856 LCHNA4D1U4 455 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 C9IYK1 514 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 SPTLC2O15270 562 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 SSBP05455 408 aaKnown RBP eCLIP11.3□□□□□ -0.6
CWC15-202ENST00000539856 NASPP49321 788 aaPredicted RBP11.3□□□□□ -0.6
CWC15-202ENST00000539856 TAP1Q03518 808 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 GRIN1Q05586 938 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
CWC15-202ENST00000539856 GRB10Q13322 594 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 CAPSQ13938 189 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 PPP2R5AQ15172 486 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 FOXD4L6Q3SYB3 417 aaPredicted RBP11.3□□□□□ -0.6
CWC15-202ENST00000539856 ATL3Q6DD88 541 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 RINT1Q6NUQ1 792 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 FOXD4L3Q6VB84 417 aaPredicted RBP11.3□□□□□ -0.6
CWC15-202ENST00000539856 KCNK18Q7Z418 384 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 SYT2Q8N9I0 419 aaPredicted RBP11.3□□□□□ -0.6
CWC15-202ENST00000539856 KRI1Q8N9T8 703 aaKnown RBP11.3□□□□□ -0.6
CWC15-202ENST00000539856 LINC00301Q8NCQ3 95 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 KIFAP3Q92845 792 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 IFT74Q96LB3 600 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 CDX2Q99626 313 aaPredicted RBP11.3□□□□□ -0.6
CWC15-202ENST00000539856 CCSER1Q9C0I3 900 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 ELAC1Q9H777 363 aaKnown RBP11.3□□□□□ -0.6
CWC15-202ENST00000539856 GPRC5CQ9NQ84 441 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 TMEM161AQ9NX61 479 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 DAXXQ9UER7 740 aaPredicted RBP11.3□□□□□ -0.6
CWC15-202ENST00000539856 FBXO2Q9UK22 296 aaPredicted RBP11.3□□□□□ -0.6
CWC15-202ENST00000539856 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 MYH15Q9Y2K3 1946 aa11.3□□□□□ -0.6
CWC15-202ENST00000539856 LINC01553A4QN01 128 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms