RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 MFSD14CQ5VZR4 134 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 TTI2Q6NXR4 508 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 KCNV1Q6PIU1 500 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 GPR142Q7Z601 462 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 CATIPQ7Z7H3 387 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 C4orf32Q8N8J7 132 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 CCDC42Q96M95 316 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 AK8Q96MA6 479 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 UBAC1Q9BSL1 405 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 SH2D4AQ9H788 454 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 TXNRD2Q9NNW7 524 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 LUC7LQ9NQ29 371 aaKnown RBP8.37□□□□□ -1.07
CCDC60-204ENST00000539847 KBTBD4Q9NVX7 518 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 LRP2BPQ9P2M1 347 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.37□□□□□ -1.07
CCDC60-204ENST00000539847 ZBTB21Q9ULJ3 1066 aa8.37□□□□□ -1.07
CCDC60-204ENST00000539847 FLT1P17948 1338 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 RNF223E7ERA6 249 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 RBAK-RBAKDNI3L0D1 243 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 DNM1LO00429 736 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 IGHA2P01877 340 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 HLA-DOAP06340 250 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 SLURP2P0DP57 97 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 GHRP10912 638 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 SYN1P17600 705 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 RXRAP19793 462 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 WEE1P30291 646 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 LSP1P33241 339 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 RDXP35241 583 aaKnown RBP8.36□□□□□ -1.07
CCDC60-204ENST00000539847 MDH1P40925 334 aaKnown RBP8.36□□□□□ -1.07
CCDC60-204ENST00000539847 MRPL12P52815 198 aaKnown RBP8.36□□□□□ -1.07
CCDC60-204ENST00000539847 BIRC3Q13489 604 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 CDC37Q16543 378 aaPredicted RBP8.36□□□□□ -1.07
CCDC60-204ENST00000539847 PTGISQ16647 500 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 LRRC26Q2I0M4 334 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 TSNAXIP1Q2TAA8 658 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 NAALADL2Q58DX5 795 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 FKBP15Q5T1M5 1219 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC60-204ENST00000539847 LPAR1Q92633 364 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 KCTD15Q96SI1 283 aaPredicted RBP8.36□□□□□ -1.07
CCDC60-204ENST00000539847 OSBPL9Q96SU4 736 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 C7orf25Q9BPX7 421 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 LBHD1Q9BQE6 289 aaPredicted RBP8.36□□□□□ -1.07
CCDC60-204ENST00000539847 TUBGCP2Q9BSJ2 902 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 LRRC1Q9BTT6 524 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 MKNK1Q9BUB5 465 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 LACRTQ9GZZ8 138 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 EHD4Q9H223 541 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 DNAJC18Q9H819 358 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 VCPKMTQ9H867 229 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 EPB41L4AQ9HCS5 686 aaPredicted RBP8.36□□□□□ -1.07
CCDC60-204ENST00000539847 JADE2Q9NQC1 790 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 HDAC6Q9UBN7 1215 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 PCDHA13Q9Y5I0 950 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 CAPN7Q9Y6W3 813 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 DDX60LQ5H9U9 1706 aaKnown RBP8.36□□□□□ -1.07
CCDC60-204ENST00000539847 UNC80Q8N2C7 3258 aa8.36□□□□□ -1.07
CCDC60-204ENST00000539847 ATP8B3O60423 1300 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 TMEM265A0A087WTH1 108 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 C5orf60A6NFR6 353 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 BTNL10A8MVZ5 291 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 ENC1O14682 589 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 ZBTB24O43167 697 aaPredicted RBP8.35□□□□□ -1.07
CCDC60-204ENST00000539847 KLRC4O43908 158 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 IDH1O75874 414 aaKnown RBP8.35□□□□□ -1.07
CCDC60-204ENST00000539847 PAEPP09466 180 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 MYBL2P10244 700 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 CDC25AP30304 524 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 SLC8A1P32418 973 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 HSPA9P38646 679 aaKnown RBP8.35□□□□□ -1.07
CCDC60-204ENST00000539847 SCTRP47872 440 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 AMPD3Q01432 767 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 MTMR3Q13615 1198 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 CUL1Q13616 776 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 SLMAPQ14BN4 828 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 NPY5RQ15761 445 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 TTMPQ5BVD1 217 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 C10orf76Q5T2E6 689 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 AGBL2Q5U5Z8 902 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 C1orf53Q5VUE5 145 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 HAUS3Q68CZ6 603 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 RUFY4Q6ZNE9 571 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 TMTC3Q6ZXV5 915 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 Q7L0L9 218 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 CEP120Q8N960 986 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 SH3RF3Q8TEJ3 882 aaPredicted RBP8.35□□□□□ -1.07
CCDC60-204ENST00000539847 RIN2Q8WYP3 895 aaPredicted RBP8.35□□□□□ -1.07
CCDC60-204ENST00000539847 P2RX5Q93086 422 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 CENPTQ96BT3 561 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 ATP6V1G3Q96LB4 118 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 NOX5Q96PH1 765 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 CCT8L2Q96SF2 557 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 KIAA1683Q9H0B3 1180 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 PORCNQ9H237 461 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 PLCB1Q9NQ66 1216 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 KLC4Q9NSK0 619 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 PRKAG2Q9UGJ0 569 aa8.35□□□□□ -1.07
CCDC60-204ENST00000539847 DDX20Q9UHI6 824 aaKnown RBP8.35□□□□□ -1.07
CCDC60-204ENST00000539847 DMGDHQ9UI17 866 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms