RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 K7ENM7 598 aa17■□□□□ 0.31
DDB1-216ENST00000539739 SLC16A4O15374 487 aa17■□□□□ 0.31
DDB1-216ENST00000539739 RHOBTB3O94955 611 aa17■□□□□ 0.31
DDB1-216ENST00000539739 PARNO95453 639 aaKnown RBP17■□□□□ 0.31
DDB1-216ENST00000539739 CHRNA1P02708 482 aa17■□□□□ 0.31
DDB1-216ENST00000539739 EFNA5P52803 228 aa17■□□□□ 0.31
DDB1-216ENST00000539739 MGAT3Q09327 533 aa17■□□□□ 0.31
DDB1-216ENST00000539739 FAM26FQ5R3K3 315 aa17■□□□□ 0.31
DDB1-216ENST00000539739 LRRC8DQ7L1W4 858 aa17■□□□□ 0.31
DDB1-216ENST00000539739 PPP1R12CQ9BZL4 782 aa17■□□□□ 0.31
DDB1-216ENST00000539739 TBC1D7Q9P0N9 293 aa17■□□□□ 0.31
DDB1-216ENST00000539739 KIAA0355O15063 1070 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 RAG1P15918 1043 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 EIF4BP23588 611 aaKnown RBP16.99■□□□□ 0.31
DDB1-216ENST00000539739 SARSP49591 514 aaKnown RBP16.99■□□□□ 0.31
DDB1-216ENST00000539739 NCKAP1LP55160 1127 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 NT5DC1Q5TFE4 455 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 CDCA2Q69YH5 1023 aaPredicted RBP16.99■□□□□ 0.31
DDB1-216ENST00000539739 STXBP4Q6ZWJ1 553 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 C7orf61Q8IZ16 206 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 CDHR5Q9HBB8 845 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 IFT122Q9HBG6 1241 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 TMEM63CQ9P1W3 806 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 PCDHB13Q9Y5F0 798 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 MYH11P35749 1972 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 INO80B-WBP1J3KQ70 363 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 K7ERI5 159 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 GCNT3O95395 438 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 TIMP1P01033 207 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 DARSP14868 501 aaKnown RBP16.99■□□□□ 0.31
DDB1-216ENST00000539739 NMT1P30419 496 aaKnown RBP16.99■□□□□ 0.31
DDB1-216ENST00000539739 EHHADHQ08426 723 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 ALCAMQ13740 583 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 ZNF720Q7Z2F6 126 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 HAUS6Q7Z4H7 955 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 IFNLR1Q8IU57 520 aaPredicted RBP16.99■□□□□ 0.31
DDB1-216ENST00000539739 USP38Q8NB14 1042 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 TMEM161BQ8NDZ6 487 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 KIFC3Q9BVG8 833 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 TMEM134Q9H6X4 195 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 ARHGAP28Q9P2N2 729 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 SQORQ9Y6N5 450 aa16.99■□□□□ 0.31
DDB1-216ENST00000539739 DENND3A2RUS2 1198 aa16.98■□□□□ 0.31
DDB1-216ENST00000539739 TRIM43BA6NCK2 446 aa16.98■□□□□ 0.31
DDB1-216ENST00000539739 LETM1O95202 739 aaPredicted RBP16.98■□□□□ 0.31
DDB1-216ENST00000539739 IQCF3P0C7M6 154 aa16.98■□□□□ 0.31
DDB1-216ENST00000539739 SFPQP23246 707 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDB1-216ENST00000539739 CYP2C18P33260 490 aa16.98■□□□□ 0.31
DDB1-216ENST00000539739 PCBP1Q15365 356 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDB1-216ENST00000539739 MAPK6Q16659 721 aa16.98■□□□□ 0.31
DDB1-216ENST00000539739 TRIM43Q96BQ3 446 aaPredicted RBP16.98■□□□□ 0.31
DDB1-216ENST00000539739 FIZ1Q96SL8 496 aa16.98■□□□□ 0.31
DDB1-216ENST00000539739 ST6GALNAC4Q9H4F1 302 aa16.98■□□□□ 0.31
DDB1-216ENST00000539739 SLC39A2Q9NP94 309 aa16.98■□□□□ 0.31
DDB1-216ENST00000539739 UMODL1Q5DID0 1318 aa16.97■□□□□ 0.31
DDB1-216ENST00000539739 ADGRA3Q8IWK6 1321 aa16.97■□□□□ 0.31
DDB1-216ENST00000539739 MKI67P46013 3256 aaKnown RBP16.97■□□□□ 0.31
DDB1-216ENST00000539739 RPS6KA5O75582 802 aa16.97■□□□□ 0.31
DDB1-216ENST00000539739 CCL23P55773 120 aa16.97■□□□□ 0.31
DDB1-216ENST00000539739 GTF2BQ00403 316 aa16.97■□□□□ 0.31
DDB1-216ENST00000539739 NCBP1Q09161 790 aaKnown RBP16.97■□□□□ 0.31
DDB1-216ENST00000539739 STRN3Q13033 797 aa16.97■□□□□ 0.31
DDB1-216ENST00000539739 FBXO47Q5MNV8 452 aa16.97■□□□□ 0.31
DDB1-216ENST00000539739 TRAF7Q6Q0C0 670 aa16.97■□□□□ 0.31
DDB1-216ENST00000539739 TRIML1Q8N9V2 468 aa16.97■□□□□ 0.31
DDB1-216ENST00000539739 HPS3Q969F9 1004 aa16.97■□□□□ 0.31
DDB1-216ENST00000539739 PRMT7Q9NVM4 692 aaPredicted RBP16.97■□□□□ 0.31
DDB1-216ENST00000539739 MAN1B1Q9UKM7 699 aa16.97■□□□□ 0.31
DDB1-216ENST00000539739 GPR182O15218 404 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 ERLIN2O94905 339 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 KIF20AO95235 890 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 GHRP10912 638 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 MBTD1Q05BQ5 628 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 STK4Q13043 487 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 ZNF658Q5TYW1 1059 aaPredicted RBP16.96■□□□□ 0.31
DDB1-216ENST00000539739 RBM43Q6ZSC3 357 aaKnown RBP16.96■□□□□ 0.31
DDB1-216ENST00000539739 TSHZ1Q6ZSZ6 1077 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 CATSPER4Q7RTX7 472 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 TMEM199Q8N511 208 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 TMEM40Q8WWA1 233 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 KCNN1Q92952 543 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 HVCN1Q96D96 273 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 MINDY3Q9H8M7 445 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 NR2E3Q9Y5X4 410 aa16.96■□□□□ 0.31
DDB1-216ENST00000539739 BIN1O00499 593 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 EIF3DO15371 548 aaKnown RBP eCLIP16.96■□□□□ 0.3
DDB1-216ENST00000539739 CSDE1O75534 798 aaKnown RBP16.96■□□□□ 0.3
DDB1-216ENST00000539739 PRKCBP05771 671 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 MYBP10242 640 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 RFC2P35250 354 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 PAK2Q13177 524 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 FAM187BQ17R55 369 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 ISM2Q6H9L7 571 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 MFSD5Q6N075 450 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 SCLYQ96I15 445 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 PRIMPOLQ96LW4 560 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 WNT8AQ9H1J5 351 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 FZD8Q9H461 694 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 TBX20Q9UMR3 447 aa16.96■□□□□ 0.3
DDB1-216ENST00000539739 EXOC7Q9UPT5 735 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms