RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 DEUP1Q05D60 604 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 ECM1Q16610 540 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 FAM26FQ5R3K3 315 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 CCDC137Q6PK04 289 aaKnown RBP13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 USP40Q9NVE5 1235 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 RASAL2Q9UJF2 1139 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 SCN11AQ9UI33 1791 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 ATP6V1G1O75348 118 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 CYP1A1P04798 512 aaPredicted RBP13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 CETPP11597 493 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 TAC1P20366 129 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 FGFR2P21802 821 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 CHKAP35790 457 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 NEK3P51956 506 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 EAPPQ56P03 285 aaPredicted RBP13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 SLFN11Q7Z7L1 901 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 NCAPG2Q86XI2 1143 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 CPNE8Q86YQ8 564 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 PRELID2Q8N945 189 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 PNMA1Q8ND90 353 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 OPTNQ96CV9 577 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 MAGEF1Q9HAY2 307 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 LRCH1Q9Y2L9 728 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 CCDC88AQ3V6T2 1871 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 TJP3O95049 919 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 GYG1P46976 350 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 MTFR1Q15390 333 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 MYLK4Q86YV6 388 aaPredicted RBP13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 SYCE1Q8N0S2 351 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 AGGF1Q8N302 714 aaeCLIP13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 KAT6BQ8WYB5 2073 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 DDX17Q92841 729 aaKnown RBP13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 AK8Q96MA6 479 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 TAS2R14Q9NYV8 317 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 HDAC9Q9UKV0 1011 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 BCS1LQ9Y276 419 aa13.11□□□□□ -0.31
PRKCQ-203ENST00000539722 VHLP40337 213 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 POLGP54098 1239 aaPredicted RBP13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 PDIA5Q14554 519 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 TAF1BQ53T94 588 aaPredicted RBP13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 RNF43Q68DV7 783 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 NLRP10Q86W26 655 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 PALB2Q86YC2 1186 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 NKIRAS1Q9NYS0 192 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 SEC63Q9UGP8 760 aaKnown RBP13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 CNOT7Q9UIV1 285 aaKnown RBP13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 STX8Q9UNK0 236 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 TIAM2Q8IVF5 1701 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 ABCB11O95342 1321 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 SLC37A4O43826 429 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 TDP2O95551 362 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 SKIP12755 728 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 NR2F2P24468 414 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 PTGIRP43119 386 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 INHBCP55103 352 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 RRP1BQ14684 758 aaKnown RBP13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 KPNB1Q14974 876 aaKnown RBP13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 NONOQ15233 471 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 PARP6Q2NL67 630 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 CNPY1Q3B7I2 92 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 ZCWPW2Q504Y3 356 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 KBTBD2Q8IY47 623 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 LNX1Q8TBB1 728 aaPredicted RBP13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 BICD1Q96G01 975 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 ANKRD27Q96NW4 1050 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 STOML1Q9UBI4 398 aa13.1□□□□□ -0.31
PRKCQ-203ENST00000539722 PVALEFA0A1B0GWK0 134 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 ABLIM1O14639 778 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 TBX10O75333 385 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 GNA14O95837 355 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 RARGP13631 454 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 DNAJC10Q8IXB1 793 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 MIPEPQ99797 713 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 RIOK1Q9BRS2 568 aaKnown RBP13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 UBA5Q9GZZ9 404 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 RIC8AQ9NPQ8 531 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 NIP7Q9Y221 180 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 WASF2Q9Y6W5 498 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 SMCO2A6NFE2 343 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 HNRNPRO43390 633 aaKnown RBP13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 COQ9O75208 318 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 PON1P27169 355 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 USP46P62068 366 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 TFAP4Q01664 338 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 DYNC1I2Q13409 638 aaKnown RBP13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 TNFAIP8L3Q5GJ75 292 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 ISLR2Q6UXK2 745 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 NEK8Q86SG6 692 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 ENDOVQ8N8Q3 282 aaKnown RBP13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 PLEKHG4BQ96PX9 1271 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 THAP2Q9H0W7 228 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 DCLRE1BQ9H816 532 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 ETNK2Q9NVF9 386 aa13.09□□□□□ -0.31
PRKCQ-203ENST00000539722 DCTN4Q9UJW0 460 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms