RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 SGSM1Q2NKQ1 1148 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 EPS8L3Q8TE67 593 aaKnown RBP12.86□□□□□ -0.35
NEK6-212ENST00000539416 UCMAQ8WVF2 138 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 ANKRD27Q96NW4 1050 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 MTA3Q9BTC8 594 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 UBE2OQ9C0C9 1292 aaKnown RBP12.86□□□□□ -0.35
NEK6-212ENST00000539416 DBR1Q9UK59 544 aaKnown RBP12.86□□□□□ -0.35
NEK6-212ENST00000539416 UTP11Q9Y3A2 253 aaKnown RBP12.86□□□□□ -0.35
NEK6-212ENST00000539416 PCDHAC2Q9Y5I4 1007 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 CYP2D7A0A087X1C5 515 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 SMAPO00193 183 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 SUN1O94901 812 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 NUDT17P0C025 328 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 FAM163BP0C2L3 166 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 TPBGLP0DKB5 382 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 CYP2D6P10635 497 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 POU5F1Q01860 360 aaKnown RBP12.85□□□□□ -0.35
NEK6-212ENST00000539416 MGAT5Q09328 741 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 PDIA5Q14554 519 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 DLGAP5Q15398 846 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 LRRC57Q8N9N7 239 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 PRMT6Q96LA8 375 aaPredicted RBP12.85□□□□□ -0.35
NEK6-212ENST00000539416 MLXIPLQ9NP71 852 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 LUC7LQ9NQ29 371 aaKnown RBP12.85□□□□□ -0.35
NEK6-212ENST00000539416 ZDHHC18Q9NUE0 388 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 CHCHD3Q9NX63 227 aaKnown RBP12.85□□□□□ -0.35
NEK6-212ENST00000539416 CCDC188H7C350 402 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 FLOT1O75955 427 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 GBP1P32455 592 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 KLC1Q07866 573 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 TROAPQ12815 778 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 RAPGEF1Q13905 1077 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 OR52E8Q6IFG1 317 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 TMTC3Q6ZXV5 915 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 FAM133AQ8N9E0 248 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 FBF1Q8TES7 1133 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 LSM14BQ9BX40 385 aaKnown RBP12.85□□□□□ -0.35
NEK6-212ENST00000539416 CCSER1Q9C0I3 900 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 PABPC3Q9H361 631 aaKnown RBP12.85□□□□□ -0.35
NEK6-212ENST00000539416 SLITRK6Q9H5Y7 841 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 OCEL1Q9H607 264 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 KANSL2Q9H9L4 492 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 ETNK1Q9HBU6 452 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 DDX4Q9NQI0 724 aaKnown RBP12.85□□□□□ -0.35
NEK6-212ENST00000539416 ZNF541Q9H0D2 1346 aa12.85□□□□□ -0.35
NEK6-212ENST00000539416 CCDC169A6NNP5 214 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 H0Y3Z8 333 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 ABLIM1O14639 778 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 COQ9O75208 318 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 GJB6O95452 261 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 CREB1P16220 341 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 GNAQP50148 359 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 DENND2CQ68D51 928 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 CATIPQ7Z7H3 387 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 DAAM2Q86T65 1068 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 GBP7Q8N8V2 638 aaPredicted RBP12.84□□□□□ -0.35
NEK6-212ENST00000539416 ATL2Q8NHH9 583 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 NEK9Q8TD19 979 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 KIFAP3Q92845 792 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 PAIP2Q9BPZ3 127 aaKnown RBP12.84□□□□□ -0.35
NEK6-212ENST00000539416 RXFP1Q9HBX9 757 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 CEP72Q9P209 647 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 COL2A1P02458 1487 aaPredicted RBP12.84□□□□□ -0.35
NEK6-212ENST00000539416 ENTPD3O75355 529 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 PLTPP55058 493 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 KLHL30Q0D2K2 578 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 PPP2R5BQ15173 497 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 LRRC23Q53EV4 343 aaPredicted RBP12.84□□□□□ -0.35
NEK6-212ENST00000539416 IFIT1BQ5T764 474 aaKnown RBP12.84□□□□□ -0.35
NEK6-212ENST00000539416 HHATQ5VTY9 493 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 ADAT2Q7Z6V5 191 aaKnown RBP12.84□□□□□ -0.35
NEK6-212ENST00000539416 STK32AQ8WU08 396 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 IFT43Q96FT9 208 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 DDX23Q9BUQ8 820 aaKnown RBP12.84□□□□□ -0.35
NEK6-212ENST00000539416 EDEM3Q9BZQ6 932 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 SEMA4AQ9H3S1 761 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 SAP30BPQ9UHR5 308 aaKnown RBP12.84□□□□□ -0.35
NEK6-212ENST00000539416 ARL2BPQ9Y2Y0 163 aa12.84□□□□□ -0.35
NEK6-212ENST00000539416 AGTP01019 485 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 SCG2P13521 617 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 CCNB1P14635 433 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 GMPSP49915 693 aaPredicted RBP12.83□□□□□ -0.35
NEK6-212ENST00000539416 KLRC3Q07444 240 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 FKBP1CQ5VVH2 108 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 LRRC55Q6ZSA7 311 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 CABP7Q86V35 215 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 ZNF513Q8N8E2 541 aaPredicted RBP12.83□□□□□ -0.35
NEK6-212ENST00000539416 GLIS3Q8NEA6 775 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 PIGOQ8TEQ8 1089 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 DYDC1Q8WWB3 177 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 ZSCAN10Q96SZ4 725 aaPredicted RBP12.83□□□□□ -0.35
NEK6-212ENST00000539416 C7orf25Q9BPX7 421 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 TDRD3Q9H7E2 651 aaKnown RBP12.83□□□□□ -0.35
NEK6-212ENST00000539416 CYP39A1Q9NYL5 469 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 PRKAG3Q9UGI9 489 aa12.83□□□□□ -0.35
NEK6-212ENST00000539416 FOXO6A8MYZ6 492 aa12.83□□□□□ -0.36
NEK6-212ENST00000539416 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms