RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 METTL16Q86W50 562 aaKnown RBP3□□□□□ -1.93
CBX3P4-201ENST00000538909 CISD2Q8N5K1 135 aaKnown RBP3□□□□□ -1.93
CBX3P4-201ENST00000538909 PLA2G15Q8NCC3 412 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 PCDH19Q8TAB3 1148 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 CPPED1Q9BRF8 314 aaPredicted RBP3□□□□□ -1.93
CBX3P4-201ENST00000538909 AKIP1Q9NQ31 210 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 ARHGEF4Q9NR80 690 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 PCDHA8Q9Y5H6 950 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 FGD5Q6ZNL6 1462 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 WRNQ14191 1432 aaPredicted RBP eCLIP3□□□□□ -1.93
CBX3P4-201ENST00000538909 ERCC6Q03468 1493 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 IFT140Q96RY7 1462 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 ZFPL1O95159 310 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 JUNP05412 331 aaKnown RBP2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 FGFR1P11362 822 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 SRSF4Q08170 494 aaKnown RBP2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 C1QL2Q7Z5L3 287 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 APBB1IPQ7Z5R6 666 aaPredicted RBP2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 CLEC14AQ86T13 490 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 LILRA3Q8N6C8 439 aaPredicted RBP2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 OR5AN1Q8NGI8 311 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 ANKS1AQ92625 1134 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 COQ10AQ96MF6 247 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 DUSP26Q9BV47 211 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 EPC1Q9H2F5 836 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 ASB1Q9Y576 335 aa2.99□□□□□ -1.93
CBX3P4-201ENST00000538909 ZNF608Q9ULD9 1512 aaPredicted RBP2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 PBRM1Q86U86 1689 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 CCDC66A2RUB6 948 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 WDR91A4D1P6 747 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 LRRC3CA6NJW4 275 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 GOLGA6L22H0YM25 854 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 RNASET2O00584 256 aaKnown RBP2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 SCAMP3O14828 347 aaKnown RBP2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 GUCY1B3Q02153 619 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 TMEM132BQ14DG7 1078 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 DGKDQ16760 1214 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 C16orf59Q7L2K0 433 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 GDF7Q7Z4P5 450 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 NT5DC4Q86YG4 428 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 CMTM4Q8IZR5 234 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 SLC44A3Q8N4M1 653 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 SLC7A14Q8TBB6 771 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 CAGE1Q8TC20 777 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 NKD2Q969F2 451 aaPredicted RBP2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 C1QTNF7Q9BXJ2 289 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 CPEB1Q9BZB8 566 aaKnown RBP2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 ST7Q9NRC1 585 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 KCNH7Q9NS40 1196 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 DNAI1Q9UI46 699 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 INPP5FQ9Y2H2 1132 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 ERICH3Q5RHP9 1530 aa2.98□□□□□ -1.93
CBX3P4-201ENST00000538909 RAD54L2Q9Y4B4 1467 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 ADAMTS12P58397 1594 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 AQP7O14520 342 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 WNT9AO14904 365 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 MAFO75444 373 aaPredicted RBP2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 RASGRP1O95267 797 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 SSBP05455 408 aaKnown RBP eCLIP2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 HNRNPLP14866 589 aaKnown RBP eCLIP2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 RGS3P49796 1198 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 GUCY1A3Q02108 690 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 ALDH6A1Q02252 535 aaKnown RBP2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 TP53BP2Q13625 1128 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 DPH6Q7L8W6 267 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 NOSTRINQ8IVI9 506 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 CPEB3Q8NE35 698 aaKnown RBP2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 ASB10Q8WXI3 467 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 WDR92Q96MX6 357 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 NDC1Q9BTX1 674 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 TEX101Q9BY14 249 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 GZF1Q9H116 711 aaPredicted RBP2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 PRKAG3Q9UGI9 489 aa2.97□□□□□ -1.93
CBX3P4-201ENST00000538909 SALL3Q9BXA9 1300 aa2.96□□□□□ -1.93
CBX3P4-201ENST00000538909 CNTNAP2Q9UHC6 1331 aa2.96□□□□□ -1.93
CBX3P4-201ENST00000538909 TRAV20A0A0B4J274 112 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 PIPSLA2A3N6 862 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 LEFTY2O00292 366 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 ESRRBO95718 433 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 RECKO95980 971 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 CFBP00751 764 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 ETFBP38117 255 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 RNASE9P60153 205 aaKnown RBP2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 NHLH1Q02575 133 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 MPP3Q13368 585 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 VPS72Q15906 364 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 BEAN1Q3B7T3 259 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 FAM47CQ5HY64 1035 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 CATSPEREQ5SY80 951 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 IQSEC1Q6DN90 963 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 ZBTB9Q96C00 473 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 SGSM3Q96HU1 749 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 DYDC2Q96IM9 177 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 HAPLN2Q9GZV7 340 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 ACBD3Q9H3P7 528 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 ALG13Q9NP73 1137 aaKnown RBP2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 MAP3K2Q9Y2U5 619 aa2.96□□□□□ -1.94
CBX3P4-201ENST00000538909 CLASP1Q7Z460 1538 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 CYSRT1A8MQ03 144 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms