RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PPP2R5CQ13362 524 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 CUL1Q13616 776 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 FAM153CQ494X1 144 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 FMNL3Q8IVF7 1028 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 SCYL3Q8IZE3 742 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 SUCLA2Q9P2R7 463 aaPredicted RBP15.81■□□□□ 0.12
CDCA3-207ENST00000538862 FAM153AQ9UHL3 310 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 DAAM1Q9Y4D1 1078 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 PCDHB13Q9Y5F0 798 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 PHIPQ8WWQ0 1821 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 TESPA1A2RU30 521 aaPredicted RBP15.8■□□□□ 0.12
CDCA3-207ENST00000538862 ZSCAN5CA6NGD5 496 aaPredicted RBP15.8■□□□□ 0.12
CDCA3-207ENST00000538862 CCDC188H7C350 402 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 PSMD10O75832 226 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 GH2P01242 217 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 STXBP4Q6ZWJ1 553 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 C10orf67Q8IYJ2 551 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 FAM186BQ8IYM0 893 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 MYCT1Q8N699 235 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 SLC5A5Q92911 643 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 FAM107BQ9H098 131 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 PARVGQ9HBI0 331 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 KCND2Q9NZV8 630 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 STXBP5LQ9Y2K9 1186 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 ESYT3A0FGR9 886 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 BHMG1C9JSJ3 638 aaPredicted RBP15.8■□□□□ 0.12
CDCA3-207ENST00000538862 PGRMC1O00264 195 aaKnown RBP15.8■□□□□ 0.12
CDCA3-207ENST00000538862 CLGNO14967 610 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 TRIM66O15016 1216 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 TBC1D12O60347 775 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 PTPRAP18433 802 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 HSPA9P38646 679 aaKnown RBP15.8■□□□□ 0.12
CDCA3-207ENST00000538862 STAT2P52630 851 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 CORO7P57737 925 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 KCNA1Q09470 495 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 RASGEF1CQ8N431 466 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.8■□□□□ 0.123e-7■■■□□ 14.6
CDCA3-207ENST00000538862 STK33Q9BYT3 514 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 PICK1Q9NRD5 415 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 ZHX2Q9Y6X8 837 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 ZMYM2Q9UBW7 1377 aa15.8■□□□□ 0.12
CDCA3-207ENST00000538862 GRIN2DO15399 1336 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 ZNF233A6NK53 670 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 DDX3XO00571 662 aaKnown RBP eCLIP15.79■□□□□ 0.124e-11■□□□□ 9.3
CDCA3-207ENST00000538862 CEP104O60308 925 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 CTNND1O60716 968 aaKnown RBP15.79■□□□□ 0.12
CDCA3-207ENST00000538862 MAGEA9P43362 315 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 ZNF131P52739 623 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 RNASE9P60153 205 aaKnown RBP15.79■□□□□ 0.12
CDCA3-207ENST00000538862 GNGT1P63211 74 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 JAG1P78504 1218 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 SNAPC2Q13487 334 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 CTTNQ14247 550 aaKnown RBP15.79■□□□□ 0.12
CDCA3-207ENST00000538862 LRCH2Q5VUJ6 765 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 PEX26Q7Z412 305 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 TPH2Q8IWU9 490 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 METTL13Q8N6R0 699 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 SLC30A5Q8TAD4 765 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 PIGOQ8TEQ8 1089 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 PIK3R5Q8WYR1 880 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 WDR18Q9BV38 432 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 AJAP1Q9UKB5 411 aaPredicted RBP15.79■□□□□ 0.12
CDCA3-207ENST00000538862 PTPRFP10586 1907 aa15.79■□□□□ 0.12
CDCA3-207ENST00000538862 A0A1W2PRG0 241 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 SFI1A8K8P3 1242 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 CCDC172P0C7W6 258 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 SOX5P35711 763 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 CRHR2Q13324 411 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 PPP2R5AQ15172 486 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 KDM7AQ6ZMT4 941 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 ZNF720Q7Z2F6 126 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 KLHL7Q8IXQ5 586 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 ZNF296Q8WUU4 475 aaPredicted RBP15.78■□□□□ 0.12
CDCA3-207ENST00000538862 DYDC2Q96IM9 177 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 NACC1Q96RE7 527 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 FIZ1Q96SL8 496 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 EHMT1Q9H9B1 1298 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 ARHGEF10LQ9HCE6 1279 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 HERC5Q9UII4 1024 aaKnown RBP15.78■□□□□ 0.12
CDCA3-207ENST00000538862 ODF2LQ9ULJ1 636 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 FRMPD4Q14CM0 1322 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 VGLL3A8MV65 326 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 BTBD19C9JJ37 291 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 GCOM1H8Y6P7 765 aaPredicted RBP15.78■□□□□ 0.12
CDCA3-207ENST00000538862 GPR25O00155 361 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 EVI5O60447 810 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 ALDH1A1P00352 501 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 KRT14P02533 472 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 POLR2MP0CAP2 368 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 CETPP11597 493 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 NMT1P30419 496 aaKnown RBP15.78■□□□□ 0.12
CDCA3-207ENST00000538862 FMO5P49326 533 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 GUCY2FP51841 1108 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 LRIG3Q6UXM1 1119 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 HS2ST1Q7LGA3 356 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 U2AF1L4Q8WU68 220 aaKnown RBP15.78■□□□□ 0.12
CDCA3-207ENST00000538862 BCAS3Q9H6U6 928 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 DMAC2Q9NW81 257 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 SMCHD1A6NHR9 2005 aa15.78■□□□□ 0.12
CDCA3-207ENST00000538862 F8VZ95 297 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms