RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 RNF216Q9NWF9 866 aaPredicted RBP15.22■□□□□ 0.03
CD9-208ENST00000538834 DNM3Q9UQ16 869 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 A0A0C4DFX4 3053 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 DENND3A2RUS2 1198 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 ARHGEF35A5YM69 484 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 RFXAPO00287 272 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 ZSCAN22P10073 491 aaPredicted RBP15.21■□□□□ 0.03
CD9-208ENST00000538834 ZSCAN20P17040 1043 aaPredicted RBP15.21■□□□□ 0.03
CD9-208ENST00000538834 GUCY2CP25092 1073 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 AXLP30530 894 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 PHKA2P46019 1235 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 EPC2Q52LR7 807 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 FAM102BQ5T8I3 360 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 USP49Q70CQ1 688 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 TMEM192Q8IY95 271 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 LINC00301Q8NCQ3 95 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 CASD1Q96PB1 797 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 NTPCRQ9BSD7 190 aaKnown RBP15.21■□□□□ 0.03
CD9-208ENST00000538834 DACT1Q9NYF0 836 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 ZDHHC9Q9Y397 364 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 MTCH2Q9Y6C9 303 aa15.21■□□□□ 0.03
CD9-208ENST00000538834 SPTBN5Q9NRC6 3674 aaKnown RBP15.2■□□□□ 0.02
CD9-208ENST00000538834 H3BNC9 293 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 INPPL1O15357 1258 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 TSPAN1O60635 241 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 F13A1P00488 732 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 RB1P06400 928 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 BMPR1AP36894 532 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 NAMPTP43490 491 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 GATMP50440 423 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 TFDP1Q14186 410 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 ARSHQ5FYA8 562 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 CLLU1OSQ5K130 101 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 LRRC55Q6ZSA7 311 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 CABP7Q86V35 215 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 FIBCD1Q8N539 461 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 RSPH1Q8WYR4 309 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 KIFAP3Q92845 792 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 P2RX5Q93086 422 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 RUSC1Q9BVN2 902 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 CWH43Q9H720 699 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 CERS4Q9HA82 394 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 KCND2Q9NZV8 630 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 PCDHB7Q9Y5E2 793 aa15.2■□□□□ 0.02
CD9-208ENST00000538834 MRPL42Q9Y6G3 142 aaKnown RBP15.2■□□□□ 0.02
CD9-208ENST00000538834 ANK1P16157 1881 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 A0A1B0GUA9 196 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 FOSL2P15408 326 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 CATSPER4Q7RTX7 472 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 ARNTL2Q8WYA1 636 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 CCDC51Q96ER9 411 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 EPSTI1Q96J88 318 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 PRIMPOLQ96LW4 560 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 GAS2L1Q99501 681 aaPredicted RBP15.19■□□□□ 0.02
CD9-208ENST00000538834 TIPINQ9BVW5 301 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 PLVAPQ9BX97 442 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 TMEM117Q9H0C3 514 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 CSRNP2Q9H175 543 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 C17orf75Q9HAS0 396 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 FAM105AQ9NUU6 356 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 DAXXQ9UER7 740 aaPredicted RBP15.19■□□□□ 0.02
CD9-208ENST00000538834 RWDD3Q9Y3V2 267 aa15.19■□□□□ 0.02
CD9-208ENST00000538834 PPP6R2O75170 966 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 YEATS4O95619 227 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 BRD1O95696 1058 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 EDN1P05305 212 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 FGFR1P11362 822 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 ARF4P18085 180 aaPredicted RBP15.18■□□□□ 0.02
CD9-208ENST00000538834 MARCKSP29966 332 aaPredicted RBP15.18■□□□□ 0.02
CD9-208ENST00000538834 DDIT3P35638 169 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 RAB27AP51159 221 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 CAMK1Q14012 370 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 BTG3Q14201 252 aaPredicted RBP15.18■□□□□ 0.02
CD9-208ENST00000538834 NAALADL2Q58DX5 795 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 ATL3Q6DD88 541 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 SMG8Q8ND04 991 aaKnown RBP15.18■□□□□ 0.02
CD9-208ENST00000538834 SCLT1Q96NL6 688 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 CLIC6Q96NY7 704 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 ARHGAP28Q9P2N2 729 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 PIN4Q9Y237 131 aaKnown RBP15.18■□□□□ 0.02
CD9-208ENST00000538834 NCOR1O75376 2440 aa15.18■□□□□ 0.02
CD9-208ENST00000538834 XIRP2A4UGR9 3374 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 TTLL13PA6NNM8 815 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 MEIS3P2A8K0S8 358 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 HOXA2O43364 376 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 PLA2G4BP0C869 781 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 SKIP12755 728 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 NCLP19338 710 aaKnown RBP15.17■□□□□ 0.02
CD9-208ENST00000538834 UBA7P41226 1012 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 COL19A1Q14993 1142 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 AXDND1Q5T1B0 1012 aaPredicted RBP15.17■□□□□ 0.02
CD9-208ENST00000538834 AGMOQ6ZNB7 445 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 MAEAQ7L5Y9 396 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 TAS1R3Q7RTX0 852 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 FBXO22Q8NEZ5 403 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 MAFAQ8NHW3 353 aaPredicted RBP15.17■□□□□ 0.02
CD9-208ENST00000538834 CCDC43Q96MW1 224 aaKnown RBP15.17■□□□□ 0.02
CD9-208ENST00000538834 POLD4Q9HCU8 107 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 LRFN2Q9ULH4 789 aa15.17■□□□□ 0.02
CD9-208ENST00000538834 CNTNAP2Q9UHC6 1331 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms