RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	NBR1	Q14596	966 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	TWF2	Q6IBS0	349 aa	Known RBP	13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PPP4R3CP	Q6ZMV5	832 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	KSR1	Q8IVT5	923 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ABI1	Q8IZP0	508 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	LRRC43	Q8N309	656 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	KIFAP3	Q92845	792 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CASD1	Q96PB1	797 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	TIPIN	Q9BVW5	301 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	C2orf40	Q9H1Z8	148 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	C17orf75	Q9HAS0	396 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	UBN1	Q9NPG3	1134 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	FAM105A	Q9NUU6	356 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	RNF19A	Q9NV58	838 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	KCND2	Q9NZV8	630 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	MTUS1	Q9ULD2	1270 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PLAGL2	Q9UPG8	496 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	DNM3	Q9UQ16	869 aa		13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PIN4	Q9Y237	131 aa	Known RBP	13.66	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PHLPP2	Q6ZVD8	1323 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	TBKBP1	A7MCY6	615 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	INPPL1	O15357	1258 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	USO1	O60763	962 aa	Known RBP	13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ERLIN2	O94905	339 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	EYA4	O95677	639 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	SRGAP2C	P0DJJ0	459 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PPM1A	P35813	382 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	NAMPT	P43490	491 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PLCB3	Q01970	1234 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CAPS	Q13938	189 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	TJAP1	Q5JTD0	557 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	FAM102B	Q5T8I3	360 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	NOTUM	Q6P988	496 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	POTEG	Q6S5H5	508 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PADI6	Q6TGC4	694 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	SNX29	Q8TEQ0	813 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	PPP2R3C	Q969Q6	453 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ZNF668	Q96K58	619 aa	Predicted RBP	13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	NSUN3	Q9H649	340 aa	Known RBP	13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	CWH43	Q9H720	699 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	MINDY3	Q9H8M7	445 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	STK39	Q9UEW8	545 aa		13.65	□□□□□ -0.22
CLTCL1-205	ENST00000538828	REV3L	O60673	3130 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	CSDE1	O75534	798 aa	Known RBP	13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	SYT1	P21579	422 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	FGFR4	P22455	802 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	EFNA5	P52803	228 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	MBTD1	Q05BQ5	628 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	IL17A	Q16552	155 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	ECM1	Q16610	540 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	AMHR2	Q16671	573 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	SPPL3	Q8TCT6	385 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	KCNN1	Q92952	543 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	HLA-C	Q95604	372 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	ASB2	Q96Q27	587 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	MMTAG2	Q9BU76	263 aa	Known RBP	13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	FZD8	Q9H461	694 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	DDX19A	Q9NUU7	478 aa	Known RBP	13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	TYW1	Q9NV66	732 aa	Known RBP	13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	KANSL3	Q9P2N6	904 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	KIAA1024	Q9UPX6	916 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	KIAA1671	Q9BY89	1806 aa		13.64	□□□□□ -0.23
CLTCL1-205	ENST00000538828	TSPAN1	O60635	241 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	ITGB1	P05556	798 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	FGFR1	P11362	822 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	NCL	P19338	710 aa	Known RBP	13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	SCP2	P22307	547 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	LONP1	P36776	959 aa	Known RBP	13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	CCDC85B	Q15834	202 aa	Predicted RBP	13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	PAN2	Q504Q3	1202 aa	Known RBP	13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	CLLU1OS	Q5K130	101 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	GLB1L	Q6UWU2	654 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	ZBTB8OS	Q8IWT0	167 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	HACE1	Q8IYU2	909 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	KLHL23	Q8NBE8	558 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	COLGALT1	Q8NBJ5	622 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	ASAP3	Q8TDY4	903 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	CSRNP2	Q9H175	543 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	BHMT2	Q9H2M3	363 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828	PCDHB2	Q9Y5E7	798 aa		13.63	□□□□□ -0.23
CLTCL1-205	ENST00000538828		A0A1B0GUA9	196 aa		13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	INO80B-WBP1	J3KQ70	363 aa		13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	GRM6	O15303	877 aa		13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	GUCY2C	P25092	1073 aa		13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	GATM	P50440	423 aa		13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	CAMK1	Q14012	370 aa		13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	PUS10	Q3MIT2	529 aa	Known RBP	13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	UBXN11	Q5T124	520 aa		13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	PPM1E	Q8WY54	764 aa		13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	PABPC5	Q96DU9	382 aa	Known RBP	13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	IFT74	Q96LB3	600 aa		13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	DRC1	Q96MC2	740 aa		13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	ZNF558	Q96NG5	402 aa		13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	NTPCR	Q9BSD7	190 aa	Known RBP	13.62	□□□□□ -0.23
CLTCL1-205	ENST00000538828	PUF60	Q9UHX1	559 aa	Known RBP	13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms