RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ERVFC1P60507 584 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 ORC2Q13416 577 aaPredicted RBP16.68■□□□□ 0.26
RAB40B-202ENST00000538809 NBR1Q14596 966 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 PLPP4Q5VZY2 271 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 KCNT2Q6UVM3 1135 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 FERMT3Q86UX7 667 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 NOSTRINQ8IVI9 506 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 PIGOQ8TEQ8 1089 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 TCP11Q8WWU5 503 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 KHSRPQ92945 711 aaKnown RBP eCLIP16.68■□□□□ 0.26
RAB40B-202ENST00000538809 PPP2R3CQ969Q6 453 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 ZNF558Q96NG5 402 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 FAM105AQ9NUU6 356 aa16.68■□□□□ 0.26
RAB40B-202ENST00000538809 USO1O60763 962 aaKnown RBP16.67■□□□□ 0.26
RAB40B-202ENST00000538809 OR52Z1P0C646 297 aa16.67■□□□□ 0.26
RAB40B-202ENST00000538809 NDUFV1P49821 464 aa16.67■□□□□ 0.26
RAB40B-202ENST00000538809 UBE3AQ05086 875 aa16.67■□□□□ 0.26
RAB40B-202ENST00000538809 CSPP1Q1MSJ5 1256 aa16.67■□□□□ 0.26
RAB40B-202ENST00000538809 TTC38Q5R3I4 469 aa16.67■□□□□ 0.26
RAB40B-202ENST00000538809 SRGAP1Q7Z6B7 1085 aa16.67■□□□□ 0.26
RAB40B-202ENST00000538809 FAM178BQ8IXR5 827 aa16.67■□□□□ 0.26
RAB40B-202ENST00000538809 ASAP3Q8TDY4 903 aa16.67■□□□□ 0.26
RAB40B-202ENST00000538809 MICAL1Q8TDZ2 1067 aa16.67■□□□□ 0.26
RAB40B-202ENST00000538809 ANKEF1Q9NU02 776 aa16.67■□□□□ 0.26
RAB40B-202ENST00000538809 INPP5FQ9Y2H2 1132 aa16.67■□□□□ 0.26
RAB40B-202ENST00000538809 PER2O15055 1255 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 MED24O75448 989 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 GLP2RO95838 553 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 SPATA31C1P0DKV0 1188 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 TECP42680 631 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 TRAPPC10P48553 1259 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 RARRES1P49788 294 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 RBM10P98175 930 aaKnown RBP16.66■□□□□ 0.26
RAB40B-202ENST00000538809 ADAM15Q13444 863 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 CAPSQ13938 189 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 PUS10Q3MIT2 529 aaKnown RBP16.66■□□□□ 0.26
RAB40B-202ENST00000538809 EFHBQ8N7U6 833 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 C4orf32Q8N8J7 132 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 MRPS27Q92552 414 aaKnown RBP16.66■□□□□ 0.26
RAB40B-202ENST00000538809 TRAIPQ9BWF2 469 aa16.66■□□□□ 0.26
RAB40B-202ENST00000538809 MRPL9Q9BYD2 267 aaKnown RBP16.66■□□□□ 0.26
RAB40B-202ENST00000538809 BARX2Q9UMQ3 279 aaPredicted RBP16.66■□□□□ 0.26
RAB40B-202ENST00000538809 NT5C1B-RDH14C9J2C7 533 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 FSCN2O14926 492 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 ASAP2O43150 1006 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 ZC3H11AO75152 810 aaKnown RBP eCLIP16.65■□□□□ 0.26
RAB40B-202ENST00000538809 DGAT1O75907 488 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 ERLIN2O94905 339 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 SKIP12755 728 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 SSTR3P32745 418 aaPredicted RBP16.65■□□□□ 0.26
RAB40B-202ENST00000538809 PPM1AP35813 382 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 MCM2P49736 904 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 TOB1P50616 345 aaPredicted RBP16.65■□□□□ 0.26
RAB40B-202ENST00000538809 RAB27AP51159 221 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 POTEGQ6S5H5 508 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 TCF25Q9BQ70 676 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 POLR3FQ9H1D9 316 aaPredicted RBP16.65■□□□□ 0.26
RAB40B-202ENST00000538809 TLE6Q9H808 572 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 TUFT1Q9NNX1 390 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 ENTPD7Q9NQZ7 604 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 SPG21Q9NZD8 308 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 CD207Q9UJ71 328 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 PCDHB2Q9Y5E7 798 aa16.65■□□□□ 0.26
RAB40B-202ENST00000538809 MBTPS2O43462 519 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 GLRA2P23416 452 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 HOXA11P31270 313 aaPredicted RBP16.64■□□□□ 0.25
RAB40B-202ENST00000538809 BCAR1P56945 870 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 PLCB3Q01970 1234 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 TFDP1Q14186 410 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 MXD4Q14582 209 aaPredicted RBP16.64■□□□□ 0.25
RAB40B-202ENST00000538809 NOMO2Q5JPE7 1267 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 UBXN11Q5T124 520 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 GLB1LQ6UWU2 654 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 MAEAQ7L5Y9 396 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 CATSPER3Q86XQ3 398 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 GJD3Q8N144 294 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 SLC39A11Q8N1S5 342 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 CPB2Q96IY4 423 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 BACH2Q9BYV9 841 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 GBP3Q9H0R5 595 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 EPHX3Q9H6B9 360 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 GPRC5CQ9NQ84 441 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 TBC1D13Q9NVG8 400 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 CLEC1BQ9P126 229 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 NOL7Q9UMY1 257 aaKnown RBP16.64■□□□□ 0.25
RAB40B-202ENST00000538809 FAM50BQ9Y247 325 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 LZTS1Q9Y250 596 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 PLXNA3P51805 1871 aa16.64■□□□□ 0.25
RAB40B-202ENST00000538809 HIDE1A8MVS5 230 aa16.63■□□□□ 0.25
RAB40B-202ENST00000538809 INO80B-WBP1J3KQ70 363 aa16.63■□□□□ 0.25
RAB40B-202ENST00000538809 B4GALT3O60512 393 aa16.63■□□□□ 0.25
RAB40B-202ENST00000538809 TSPAN1O60635 241 aa16.63■□□□□ 0.25
RAB40B-202ENST00000538809 OFD1O75665 1012 aa16.63■□□□□ 0.25
RAB40B-202ENST00000538809 PTENP60484 403 aa16.63■□□□□ 0.25
RAB40B-202ENST00000538809 SMAD4Q13485 552 aaKnown RBP16.63■□□□□ 0.25
RAB40B-202ENST00000538809 DUSP6Q16828 381 aa16.63■□□□□ 0.25
RAB40B-202ENST00000538809 AGMOQ6ZNB7 445 aa16.63■□□□□ 0.25
RAB40B-202ENST00000538809 TMEM173Q86WV6 379 aaPredicted RBP16.63■□□□□ 0.25
RAB40B-202ENST00000538809 VN1R2Q8NFZ6 395 aa16.63■□□□□ 0.25
RAB40B-202ENST00000538809 MSLNLQ96KJ4 702 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms