RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 GCLMP48507 274 aa12.96□□□□□ -0.34
CPNE8-203ENST00000538596 PPP3CAQ08209 521 aa12.96□□□□□ -0.34
CPNE8-203ENST00000538596 IL31RAQ8NI17 732 aa12.96□□□□□ -0.34
CPNE8-203ENST00000538596 ATP8B4Q8TF62 1192 aa12.96□□□□□ -0.34
CPNE8-203ENST00000538596 LRRC45Q96CN5 670 aa12.96□□□□□ -0.34
CPNE8-203ENST00000538596 AGBL1Q96MI9 1066 aa12.96□□□□□ -0.34
CPNE8-203ENST00000538596 CCT8L2Q96SF2 557 aa12.96□□□□□ -0.34
CPNE8-203ENST00000538596 CNOT8Q9UFF9 292 aaKnown RBP12.96□□□□□ -0.34
CPNE8-203ENST00000538596 E7EVH7 732 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 ATMINO43313 823 aaPredicted RBP12.95□□□□□ -0.34
CPNE8-203ENST00000538596 USP8P40818 1118 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 FKBP1AP62942 108 aaKnown RBP12.95□□□□□ -0.34
CPNE8-203ENST00000538596 NFIL3Q16649 462 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 PADI6Q6TGC4 694 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 CPNE8Q86YQ8 564 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 CCDC26Q8TAB7 109 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 ZNF473Q8WTR7 871 aaKnown RBP12.95□□□□□ -0.34
CPNE8-203ENST00000538596 KRT35Q92764 455 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 WDR11Q9BZH6 1224 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 PDGFDQ9GZP0 370 aaPredicted RBP12.95□□□□□ -0.34
CPNE8-203ENST00000538596 RANBP17Q9H2T7 1088 aaKnown RBP12.95□□□□□ -0.34
CPNE8-203ENST00000538596 SLITRK6Q9H5Y7 841 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 ATP8A1Q9Y2Q0 1164 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 UTP11Q9Y3A2 253 aaKnown RBP12.95□□□□□ -0.34
CPNE8-203ENST00000538596 H0YIN7 160 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 EMC10Q5UCC4 262 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 FBXW10Q5XX13 1052 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 LRIG3Q6UXM1 1119 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 NLRP14Q86W24 1093 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 LDHDQ86WU2 507 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 MYCBPAPQ8TBZ2 947 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 COL20A1Q9P218 1284 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 NOVA2Q9UNW9 492 aaKnown RBP12.95□□□□□ -0.34
CPNE8-203ENST00000538596 ERLIN2O94905 339 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 ODF2Q5BJF6 829 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 UBAP2Q5T6F2 1119 aaKnown RBP12.95□□□□□ -0.34
CPNE8-203ENST00000538596 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 PLEKHO2Q8TD55 490 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 AGPAT1Q99943 283 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 STRA6Q9BX79 667 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 TEKT3Q9BXF9 490 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 GOPCQ9HD26 462 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 SEL1LQ9UBV2 794 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 ODF2LQ9ULJ1 636 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 ALG6Q9Y672 507 aa12.95□□□□□ -0.34
CPNE8-203ENST00000538596 CLSTN1O94985 981 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 FTLP02792 175 aaPredicted RBP12.94□□□□□ -0.34
CPNE8-203ENST00000538596 INPP5BP32019 993 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 PPP2R5AQ15172 486 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 LLGL1Q15334 1064 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 B3GNT9Q6UX72 402 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 EIF1ADQ8N9N8 165 aaKnown RBP12.94□□□□□ -0.34
CPNE8-203ENST00000538596 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.94□□□□□ -0.34
CPNE8-203ENST00000538596 SEC14L1Q92503 715 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
CPNE8-203ENST00000538596 ANKRD62A6NC57 917 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 GOLGA8IPA6NC78 632 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 GOLGA8JA6NMD2 632 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 PPIP5K2O43314 1243 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 RAD17O75943 681 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 MAGOHP61326 146 aaKnown RBP12.94□□□□□ -0.34
CPNE8-203ENST00000538596 DR1Q01658 176 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
CPNE8-203ENST00000538596 DGKZQ13574 1117 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 KIF22Q14807 665 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 C1orf220Q5T0J3 134 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 ZDHHC14Q8IZN3 488 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 MAGOHBQ96A72 148 aaKnown RBP12.94□□□□□ -0.34
CPNE8-203ENST00000538596 C18orf8Q96DM3 657 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 BTBD6Q96KE9 485 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 TMEM39BQ9GZU3 492 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 VEZTQ9HBM0 779 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 GPRC5CQ9NQ84 441 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 KCNH7Q9NS40 1196 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 CTTNBP2NLQ9P2B4 639 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 SNX24Q9Y343 169 aa12.94□□□□□ -0.34
CPNE8-203ENST00000538596 MRPL11Q9Y3B7 192 aaKnown RBP12.94□□□□□ -0.34
CPNE8-203ENST00000538596 ATP8B3O60423 1300 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 NFIBO00712 420 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 SHBGP04278 402 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 GUCY2CP25092 1073 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 PTENP60484 403 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 KRT71Q3SY84 523 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 STXBP4Q6ZWJ1 553 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 RPUSD2Q8IZ73 545 aaKnown RBP12.93□□□□□ -0.34
CPNE8-203ENST00000538596 PCDHB18PQ96TA0 734 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 SLC12A6Q9UHW9 1150 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 HERC5Q9UII4 1024 aaKnown RBP12.93□□□□□ -0.34
CPNE8-203ENST00000538596 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 A6NNZ2 444 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 SGPL1O95470 568 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 KRT13P13646 458 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 VAMP7P51809 220 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 PLTPP55058 493 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 SPP2Q13103 211 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 TUBB8Q3ZCM7 444 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 MIER3Q7Z3K6 550 aa12.93□□□□□ -0.34
CPNE8-203ENST00000538596 C1orf131Q8NDD1 294 aaKnown RBP12.93□□□□□ -0.34
CPNE8-203ENST00000538596 FMO2Q99518 471 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms