RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 KLHDC9Q8NEP7 349 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 GOLGA5Q8TBA6 731 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ENOX1Q8TC92 643 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 LMBR1Q8WVP7 490 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SPIRE2Q8WWL2 714 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 KAT2BQ92831 832 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 XPNPEP1Q9NQW7 623 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NFE2L3Q9Y4A8 694 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ARID2Q68CP9 1835 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 UBE4BO95155 1302 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 INO80B-WBP1J3KQ70 363 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 IKBKBO14920 756 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CETN3O15182 167 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 TPM3P06753 285 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 GLRA2P23416 452 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 LIG4P49917 911 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MAPK7Q13164 816 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 HSP90AA2PQ14568 343 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MTFR1Q15390 333 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CCDC40Q4G0X9 1142 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 FILIP1LQ4L180 1135 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ANKRD40Q6AI12 368 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 DRC7Q8IY82 874 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 KIAA0895Q8NCT3 520 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ZNF507Q8TCN5 953 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ASAP3Q8TDY4 903 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 HVCN1Q96D96 273 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ZBTB10Q96DT7 871 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ABHD8Q96I13 439 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ZNF668Q96K58 619 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 TCHPQ9BT92 498 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SRRTQ9BXP5 876 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 GCOM2Q9BZD3 368 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 INO80BQ9C086 356 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PDLIM7Q9NR12 457 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PCDHA2Q9Y5H9 948 aa11.71□□□□□ -0.53
TNFRSF1A-211ENST00000538363 A0A0U1RQG5 324 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 SMIM35A0A1B0GVV1 85 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 HAS3O00219 553 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 TLR3O15455 904 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 TREHO43280 583 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 ERLIN2O94905 339 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 VTNP04004 478 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 RPLP2P05387 115 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 MTIF2P46199 727 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 NCKAP1LP55160 1127 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 NLRP11P59045 1033 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 NKX3-2P78367 333 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 FKBP3Q00688 224 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 LRRC63Q05C16 580 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 PTPN11Q06124 597 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 SPAG1Q07617 926 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 ADAM9Q13443 819 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 PTGISQ16647 500 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 MAPK6Q16659 721 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 COBLL1Q53SF7 1204 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 HSP90AA4PQ58FG1 418 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 LHX8Q68G74 356 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 TAF2Q6P1X5 1199 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 KSR1Q8IVT5 923 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 DAW1Q8N136 415 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 NME8Q8N427 588 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 SCFD1Q8WVM8 642 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 DNAJB3Q8WWF6 145 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 SLC39A7Q92504 469 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 KIFC3Q9BVG8 833 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 TRIM5Q9C035 493 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 GBP3Q9H0R5 595 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 TYW1Q9NV66 732 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 FANCLQ9NW38 375 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 TBX20Q9UMR3 447 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 FRMD4BQ9Y2L6 1034 aa11.7□□□□□ -0.54
TNFRSF1A-211ENST00000538363 EVPLQ92817 2033 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 A0A087WZ62 844 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 A0A1W2PQ45 241 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 A0A1W2PQY0 241 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 TRIM49BA6NDI0 452 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 ZBTB42B2RXF5 422 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 DNM1LO00429 736 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 PDXKO00764 312 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 HNRNPDLO14979 420 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 CLIC2O15247 247 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 CBFA2T2O43439 604 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 CASP5P51878 434 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 ZNF200P98182 395 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 EHHADHQ08426 723 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 TMEM62Q0P6H9 643 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 CAPSQ13938 189 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 IQCB1Q15051 598 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 CEP135Q66GS9 1140 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 CENPPQ6IPU0 288 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 ARMCX5Q6P1M9 558 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 APBB1IPQ7Z5R6 666 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 DHX40Q8IX18 779 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 ZNF710Q8N1W2 664 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 GLIS3Q8NEA6 775 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 BSNDQ8WZ55 320 aa11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 FDXACB1Q9BRP7 624 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-211ENST00000538363 NTPCRQ9BSD7 190 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms