RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 TECP42680 631 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SOX10P56693 466 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 CHMP4BP1P59074 171 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SMAD3P84022 425 aaKnown RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 NR5A1Q13285 461 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 FAM187BQ17R55 369 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PRAMEF19Q5SWL8 479 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 FAM109BQ6ICB4 259 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 EFCAB12Q6NXP0 572 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SYCP3Q8IZU3 236 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SYT2Q8N9I0 419 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 LINC00301Q8NCQ3 95 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TRPV1Q8NER1 839 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TBC1D5Q92609 795 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 BICD1Q96G01 975 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 DYDC2Q96IM9 177 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 NOC4LQ9BVI4 516 aaKnown RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 ST6GALNAC4Q9H4F1 302 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 KMT5AQ9NQR1 393 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 LMCD1Q9NZU5 365 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 HDAC6Q9UBN7 1215 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TBX21Q9UL17 535 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 MAFFQ9ULX9 164 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PCDHB7Q9Y5E2 793 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PCDHA11Q9Y5I1 949 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 RBBP6Q7Z6E9 1792 aaKnown RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PLXNB2O15031 1838 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 K7ERI5 159 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 IL18RAPO95256 599 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PLA2G4BP0C869 781 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 MCF2P10911 925 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 NAT2P11245 290 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 KRT13P13646 458 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PLS3P13797 630 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 EIF4BP23588 611 aaKnown RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 KRT17Q04695 432 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 FAM160A1Q05DH4 1040 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SPAG1Q07617 926 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TRIM60Q495X7 471 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 COL13A1Q5TAT6 717 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 ICE2Q659A1 982 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 GPBP1Q86WP2 473 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TTC30AQ86WT1 665 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 FAM178BQ8IXR5 827 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 CMTR2Q8IYT2 770 aaKnown RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 IL31RAQ8NI17 732 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 RASGRP4Q8TDF6 673 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 HERVK_113Q902F9 699 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 RAD54LQ92698 747 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 IQCDQ96DY2 449 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 RNPC3Q96LT9 517 aaKnown RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 HSD17B14Q9BPX1 270 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 C16orf70Q9BSU1 422 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 COLEC11Q9BWP8 271 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 IRF2BPLQ9H1B7 796 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PLEKHA5Q9HAU0 1116 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PDGFCQ9NRA1 345 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 KLHL42Q9P2K6 505 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 VAV3Q9UKW4 847 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 KIAA1024Q9UPX6 916 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 GIT1Q9Y2X7 761 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PCDHB12Q9Y5F1 795 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 ZBBXA8MT70 800 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 GOLGA6L6A8MZA4 724 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PSMA7O14818 248 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 ADCY6O43306 1168 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 STK10O94804 968 aaKnown RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 LARGE1O95461 756 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 CD4P01730 458 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 CXCL10P02778 98 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SLFN14P0C7P3 912 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 CTGFP29279 349 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 HOXC8P31273 242 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 MATR3P43243 847 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 ASIC1P78348 528 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 BEX3Q00994 111 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TPD52L1Q16890 204 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 AAK1Q2M2I8 961 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SLC35G1Q2M3R5 365 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TMEM119Q4V9L6 283 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TIGD5Q53EQ6 642 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SWT1Q5T5J6 900 aaKnown RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 FAM102BQ5T8I3 360 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TYW1BQ6NUM6 668 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 B3GNT9Q6UX72 402 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 CYP26C1Q6V0L0 522 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SLC24A5Q71RS6 500 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 MNS1Q8NEH6 495 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 FBXO22Q8NEZ5 403 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SMARCE1Q969G3 411 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 GSDMAQ96QA5 445 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TMEM175Q9BSA9 504 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PANK2Q9BZ23 570 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 IMPG2Q9BZV3 1241 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TMEM117Q9H0C3 514 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 TMX1Q9H3N1 280 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 DHX33Q9H6R0 707 aaKnown RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 SUGCTQ9HAC7 445 aa3.92□□□□□ -1.78
PTPN22-211ENST00000538253 METTL14Q9HCE5 456 aaKnown RBP3.92□□□□□ -1.78
PTPN22-211ENST00000538253 PDLIM7Q9NR12 457 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms