RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 EFCAB8A8MWE9 144 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 CYP4F22Q6NT55 531 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 TOGARAM2Q6ZUX3 1019 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 ENOX1Q8TC92 643 aaKnown RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 ACER1Q8TDN7 264 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 ASNSD1Q9NWL6 643 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 HEY1Q9Y5J3 304 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 TNS2Q63HR2 1409 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 SRGAP2O75044 1071 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 EYA4O95677 639 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 TRIM49P0CI25 452 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 TRIM49CP0CI26 452 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 TCF7P36402 384 aaPredicted RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 EFNA5P52803 228 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 KCNH2Q12809 1159 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 XKR3Q5GH77 459 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 ERO1BQ86YB8 467 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 APPL2Q8NEU8 664 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 MRFAP1L1Q96HT8 127 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 GLT1D1Q96MS3 346 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 C11orf70Q9BRQ4 267 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 AP1M1Q9BXS5 423 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 JMJD4Q9H9V9 463 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 CNOT8Q9UFF9 292 aaKnown RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 AGAP1Q9UPQ3 857 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 TMEM131LA2VDJ0 1609 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 NSUN2Q08J23 767 aaKnown RBP eCLIP5.74□□□□□ -1.49
LRP6-203ENST00000538239 MXD4Q14582 209 aaPredicted RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 KYAT1Q16773 422 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 TMEM35BQ8NCS4 154 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 CDC26Q8NHZ8 85 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 FAF2Q96CS3 445 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 FSD1LQ9BXM9 530 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 SP110Q9HB58 689 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 PCSK1NQ9UHG2 260 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 STRIP2Q9ULQ0 834 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 PXDNLA1KZ92 1463 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 USP32Q8NFA0 1604 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 STXBP3O00186 592 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 PDHXO00330 501 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 TRAPPC3O43617 180 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 TROVE2P10155 538 aaKnown RBP eCLIP5.74□□□□□ -1.49
LRP6-203ENST00000538239 TBXAS1P24557 533 aaPredicted RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 NFKBIAP25963 317 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 NFIAQ12857 509 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 DUOXA2Q1HG44 320 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 TMTC4Q5T4D3 741 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 FBXO16Q8IX29 292 aaPredicted RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 PGBD3Q8N328 593 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 HPS3Q969F9 1004 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 ZNF512BQ96KM6 892 aaPredicted RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 SPON2Q9BUD6 331 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 SYNDIG1Q9H7V2 258 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 KLHL8Q9P2G9 620 aaPredicted RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 PPLO60437 1756 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 FAM205CA6NFA0 338 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 DFFAO00273 331 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 NDUFAB1O14561 156 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 NPTXRO95502 500 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 PSMC1P62191 440 aaKnown RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 ZNF746Q6NUN9 644 aaPredicted RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 RPGRIP1Q96KN7 1286 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 MXRA8Q9BRK3 442 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 MOV10L1Q9BXT6 1211 aaKnown RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 FARP1Q9Y4F1 1045 aaPredicted RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 EMSYQ7Z589 1322 aa5.74□□□□□ -1.49
LRP6-203ENST00000538239 COL5A2P05997 1499 aaPredicted RBP5.74□□□□□ -1.49
LRP6-203ENST00000538239 PDGFRBP09619 1106 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 CDC25BP30305 580 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 MNAT1P51948 309 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ORC2Q13416 577 aaPredicted RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 TMEM132DQ14C87 1099 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 TMED2Q15363 201 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ANKRD20A3Q5VUR7 823 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 HEMGNQ9BXL5 484 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 SENP2Q9HC62 589 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ERAP1Q9NZ08 941 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 YY1P25490 414 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ZBED6P86452 979 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ATP11AP98196 1134 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 MAP7Q14244 749 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 MGAT5BQ3V5L5 792 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 C3orf67Q6ZVT6 689 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 SGMS1Q86VZ5 419 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ZNF579Q8NAF0 562 aaKnown RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 IGDCC4Q8TDY8 1250 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 SCFD2Q8WU76 684 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 N4BP2L2Q92802 583 aaPredicted RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 DNAJC17Q9NVM6 304 aaKnown RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 SEL1LQ9UBV2 794 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 NOL3O60936 208 aaKnown RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 ZMYND10O75800 440 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 PLTPP55058 493 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 COG7P83436 770 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 AP1B1Q10567 949 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 LAMC2Q13753 1193 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 RBBP5Q15291 538 aaKnown RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 JADE1Q6IE81 842 aa5.73□□□□□ -1.49
LRP6-203ENST00000538239 ZNF467Q7Z7K2 595 aaPredicted RBP5.73□□□□□ -1.49
LRP6-203ENST00000538239 ZDHHC15Q96MV8 337 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms