RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 PLCB1Q9NQ66 1216 aa11.72□□□□□ -0.53
CLIP1-210ENST00000538120 ANKEF1Q9NU02 776 aa11.72□□□□□ -0.53
CLIP1-210ENST00000538120 PCDHA13Q9Y5I0 950 aa11.72□□□□□ -0.53
CLIP1-210ENST00000538120 SSU72P8A0A1W2PR75 194 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 SPATA31C2B4DYI2 1134 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 ZNF862O60290 1169 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.53
CLIP1-210ENST00000538120 PLS3P13797 630 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 DCAF17Q5H9S7 520 aaPredicted RBP11.71□□□□□ -0.53
CLIP1-210ENST00000538120 KLHDC7AQ5VTJ3 777 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 SFMBT2Q5VUG0 894 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 C9orf131Q5VYM1 1079 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 STXBP4Q6ZWJ1 553 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 ANO5Q75V66 913 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 SULF1Q8IWU6 871 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 FAM186BQ8IYM0 893 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 RIN2Q8WYP3 895 aaPredicted RBP11.71□□□□□ -0.53
CLIP1-210ENST00000538120 MMS19Q96T76 1030 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 HINFPQ9BQA5 517 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 MKNK1Q9BUB5 465 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 TSPYL1Q9H0U9 437 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 NUCKS1Q9H1E3 243 aaKnown RBP11.71□□□□□ -0.53
CLIP1-210ENST00000538120 FAM204AQ9H8W3 233 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 GPRC5CQ9NQ84 441 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 AIPL1Q9NZN9 384 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 PCDHA10Q9Y5I2 948 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 K7ENM7 598 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 TUBB2AQ13885 445 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 MOB2Q70IA6 237 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 SLC9A9Q8IVB4 645 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 GSPT2Q8IYD1 628 aaKnown RBP11.71□□□□□ -0.53
CLIP1-210ENST00000538120 CLMNQ96JQ2 1002 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 CAPZA3Q96KX2 299 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 TUBB2BQ9BVA1 445 aa11.71□□□□□ -0.53
CLIP1-210ENST00000538120 AJAP1Q9UKB5 411 aaPredicted RBP11.71□□□□□ -0.53
CLIP1-210ENST00000538120 TISP43B9A030 160 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 RBAK-RBAKDNI3L0D1 243 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 IRF6O14896 467 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 KRT86O43790 486 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 PPP1R12BO60237 982 aaPredicted RBP11.7□□□□□ -0.54
CLIP1-210ENST00000538120 SYF2O95926 243 aaKnown RBP11.7□□□□□ -0.54
CLIP1-210ENST00000538120 SERPING1P05155 500 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 CYP2J2P51589 502 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 SP2Q02086 613 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 CNTN2Q02246 1040 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 GFPT1Q06210 699 aaPredicted RBP11.7□□□□□ -0.54
CLIP1-210ENST00000538120 SPA17Q15506 151 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 EXOC3L4Q17RC7 722 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 SKIDA1Q1XH10 827 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 LRRC31Q6UY01 552 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 HS2ST1Q7LGA3 356 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 TRMT1LQ7Z2T5 733 aaKnown RBP11.7□□□□□ -0.54
CLIP1-210ENST00000538120 TRAPPC11Q7Z392 1133 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 CHST13Q8NET6 341 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 ST6GALNAC4Q9H4F1 302 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 ELP3Q9H9T3 547 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 LARSQ9P2J5 1176 aaKnown RBP11.7□□□□□ -0.54
CLIP1-210ENST00000538120 GABBR1Q9UBS5 961 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 CSADQ9Y600 493 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 NFASCO94856 1347 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 LOC285556D6RIA3 1793 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 LCTP09848 1927 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 AKR1B10O60218 316 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 IPO7O95373 1038 aaKnown RBP11.7□□□□□ -0.54
CLIP1-210ENST00000538120 UCHL3P15374 230 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 GTF2BQ00403 316 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 HSP90B2PQ58FF3 399 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 XKR9Q5GH70 373 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 TCERG1LQ5VWI1 586 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 MSL3Q8N5Y2 521 aaKnown RBP11.7□□□□□ -0.54
CLIP1-210ENST00000538120 FAM71BQ8TC56 605 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 TMEM174Q8WUU8 243 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 TIPINQ9BVW5 301 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 IFIH1Q9BYX4 1025 aaKnown RBP11.7□□□□□ -0.54
CLIP1-210ENST00000538120 LOXHD1Q8IVV2 1947 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 OTOFQ9HC10 1997 aa11.7□□□□□ -0.54
CLIP1-210ENST00000538120 A0A0G2JLL6 359 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-210ENST00000538120 GTPBP10A4D1E9 387 aaKnown RBP11.69□□□□□ -0.54
CLIP1-210ENST00000538120 RNF40O75150 1001 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 STAM2O75886 525 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 MYBL2P10244 700 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 TNNT3P45378 269 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-210ENST00000538120 NCKAP1LP55160 1127 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 RAPGEF1Q13905 1077 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 MYBPC2Q14324 1141 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 SLC9C1Q4G0N8 1177 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 WDR93Q6P2C0 686 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 ABHD15Q6UXT9 468 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 GBP6Q6ZN66 633 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 IRF2BP2Q7Z5L9 587 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 PRRT2Q7Z6L0 340 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-210ENST00000538120 RIOX2Q8IUF8 465 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 CDCA5Q96FF9 252 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 IWS1Q96ST2 819 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 R3HDMLQ9H3Y0 253 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 DEF6Q9H4E7 631 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 ZC3H4Q9UPT8 1303 aaKnown RBP11.69□□□□□ -0.54
CLIP1-210ENST00000538120 ZNF185O15231 689 aa11.69□□□□□ -0.54
CLIP1-210ENST00000538120 PJA2O43164 708 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms