RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 KCNJ6P48051 423 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 PSMC1P62191 440 aaKnown RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 TMEM259Q4ZIN3 620 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 UNC13DQ70J99 1090 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 CENPUQ71F23 418 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 CCDC197Q8NCU1 140 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 COG4Q9H9E3 785 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 TNS3Q68CZ2 1445 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 DYNC1LI2O43237 492 aaPredicted RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 DNAJC6O75061 913 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 CHEK2O96017 543 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 NUMBP49757 651 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 SULT1E1P49888 294 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 KPNA2P52292 529 aaKnown RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 PTCH1Q13635 1447 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 ANKRD20A4Q4UJ75 823 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 ANKRD20A8PQ5CZ79 823 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 ANKRD20A2Q5SQ80 823 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 ANKRD20A1Q5TYW2 823 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 SPATA2LQ8IUW3 424 aaPredicted RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 PIP4K2CQ8TBX8 421 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 LBHD1Q9BQE6 289 aaPredicted RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 VPS11Q9H270 941 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 PACSIN2Q9UNF0 486 aaPredicted RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 H3BRJ5 948 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 IPO5O00410 1097 aaKnown RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 TTI1O43156 1089 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 CC2D1AQ6P1N0 951 aaPredicted RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 TRIM59Q8IWR1 403 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 RNF149Q8NC42 400 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 DHX38Q92620 1227 aaKnown RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 SPON1Q9HCB6 807 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 NFU1Q9UMS0 254 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 ABCC3O15438 1527 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 EEF1B2P24534 225 aaKnown RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 QARSP47897 775 aaKnown RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 LRRC63Q05C16 580 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 LDHDQ86WU2 507 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 GAS2L3Q86XJ1 694 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 LINC00116Q8NCU8 138 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 XAB2Q9HCS7 855 aaKnown RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 PSMD14O00487 310 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 CELF2O95319 508 aaKnown RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 SERPIND1P05546 499 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 C6orf222P0C671 652 aaPredicted RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 TAC1P20366 129 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 YWHABP31946 246 aaKnown RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 EPHB4P54760 987 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 ARID5BQ14865 1188 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 XXYLT1Q8NBI6 393 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 TDRD7Q8NHU6 1098 aaKnown RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 RAPGEF5Q92565 580 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 EGFL8Q99944 293 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 RBAKQ9NYW8 714 aaPredicted RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 CPSF2Q9P2I0 782 aaKnown RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 PRDM15P57071 1507 aaPredicted RBP11.94□□□□□ -0.5
LINC00346-201ENST00000538077 APOEP02649 317 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 BTBD8Q5XKL5 378 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 VSTM4Q8IW00 320 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 SP8Q8IXZ3 490 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 SEPT5Q99719 369 aaPredicted RBP11.94□□□□□ -0.5
LINC00346-201ENST00000538077 DHX35Q9H5Z1 703 aaKnown RBP11.94□□□□□ -0.5
LINC00346-201ENST00000538077 DYRK4Q9NR20 520 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 CLCA2Q9UQC9 943 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 IQCA1LA6NCM1 817 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 TADA2AO75478 443 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 KRT76Q01546 638 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 NNTQ13423 1086 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 ALKBH5Q6P6C2 394 aaKnown RBP11.94□□□□□ -0.5
LINC00346-201ENST00000538077 MCPH1Q8NEM0 835 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 SLC4A7Q9Y6M7 1214 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 IQANK1A0A1B0GTG1 560 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 CCDC78A2IDD5 438 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 POLRMTO00411 1230 aaKnown RBP11.94□□□□□ -0.5
LINC00346-201ENST00000538077 IKBKBO14920 756 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 P4HBP07237 508 aaKnown RBP11.94□□□□□ -0.5
LINC00346-201ENST00000538077 TRIM49P0CI25 452 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 TRIM49CP0CI26 452 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 NECTIN1Q15223 517 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 DGKHQ86XP1 1220 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 AGR3Q8TD06 166 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 HPS3Q969F9 1004 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 FAN1Q9Y2M0 1017 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 BCORL1Q5H9F3 1711 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 C2CD2LO14523 706 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 ZBED6P86452 979 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 TAF1BQ53T94 588 aaPredicted RBP11.94□□□□□ -0.5
LINC00346-201ENST00000538077 FAM102AQ5T9C2 384 aaPredicted RBP11.94□□□□□ -0.5
LINC00346-201ENST00000538077 FAM84BQ96KN1 310 aaPredicted RBP11.94□□□□□ -0.5
LINC00346-201ENST00000538077 PPRC1Q5VV67 1664 aaKnown RBP11.94□□□□□ -0.5
LINC00346-201ENST00000538077 GOLGA8QA0A0J9YX86 632 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 GOLGA8OA6NCC3 632 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 GOLGA8NF8WBI6 632 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 ASMTLO95671 621 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 LIFRP42702 1097 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 FOXO4P98177 505 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 MLXIPLQ9NP71 852 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 MAP3K20Q9NYL2 800 aaKnown RBP11.94□□□□□ -0.5
LINC00346-201ENST00000538077 GGA3Q9NZ52 723 aa11.94□□□□□ -0.5
LINC00346-201ENST00000538077 ABCA6Q8N139 1617 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms