RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 FKBP1AP62942 108 aaKnown RBP9.44□□□□□ -0.9
UBE3B-208ENST00000538070 IFI16Q16666 785 aaKnown RBP9.44□□□□□ -0.9
UBE3B-208ENST00000538070 TMEM132AQ24JP5 1023 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 CEP85LQ5SZL2 805 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 CPNE8Q86YQ8 564 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 MCF2L2Q86YR7 1114 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 TPCN2Q8NHX9 752 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 ACCSQ96QU6 501 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 KMT5AQ9NQR1 393 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 ANKFY1Q9P2R3 1169 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 PPP1R9AQ9ULJ8 1098 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 ANKRD63C9JTQ0 380 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 TTI1O43156 1089 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 PJA2O43164 708 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 DAPK3O43293 454 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 SETQ01105 290 aaPredicted RBP9.43□□□□□ -0.9
UBE3B-208ENST00000538070 CCDC25Q86WR0 208 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 MMGT1Q8N4V1 131 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 XXYLT1Q8NBI6 393 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 EXOC4Q96A65 974 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 CAMKK2Q96RR4 588 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 CEP89Q96ST8 783 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 GMLQ99445 158 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 FAM213AQ9BRX8 229 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 AGO4Q9HCK5 861 aaKnown RBP9.43□□□□□ -0.9
UBE3B-208ENST00000538070 OLFML3Q9NRN5 406 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 APEX2Q9UBZ4 518 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 ZMYM2Q9UBW7 1377 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 SART1O43290 800 aaKnown RBP9.43□□□□□ -0.9
UBE3B-208ENST00000538070 SPOPO43791 374 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 SGPL1O95470 568 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 PDCLQ13371 301 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 TMEM143Q96AN5 459 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 ZIM3Q96PE6 472 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 TCHPQ9BT92 498 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 BZW2Q9Y6E2 419 aaKnown RBP9.43□□□□□ -0.9
UBE3B-208ENST00000538070 BRWD3Q6RI45 1802 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 ZNF536O15090 1300 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 LRRIQ4A6NIV6 560 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 PGRMC1O00264 195 aaKnown RBP9.43□□□□□ -0.9
UBE3B-208ENST00000538070 BCRP11274 1271 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 TNNI1P19237 187 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 ACTN2P35609 894 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 VPS41P49754 854 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 SMTNP53814 917 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 EPHB4P54760 987 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 GNGT1P63211 74 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 PAK2Q13177 524 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 PASD1Q8IV76 773 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 USP38Q8NB14 1042 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 LMBR1Q8WVP7 490 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 SYN2Q92777 582 aaPredicted RBP9.43□□□□□ -0.9
UBE3B-208ENST00000538070 GLG1Q92896 1179 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 PPP1R16BQ96T49 567 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 CCDC113Q9H0I3 377 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 MED4Q9NPJ6 270 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 NR2E1Q9Y466 385 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 STK24Q9Y6E0 443 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 ATRNL1Q5VV63 1379 aa9.43□□□□□ -0.9
UBE3B-208ENST00000538070 TARSL2A2RTX5 802 aaKnown RBP9.42□□□□□ -0.9
UBE3B-208ENST00000538070 LCA5LO95447 670 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 CCNE2O96020 404 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 NR3C2P08235 984 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 MARK3P27448 753 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 ACOT2P49753 483 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 MMP14P50281 582 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 DMP1Q13316 513 aaPredicted RBP9.42□□□□□ -0.9
UBE3B-208ENST00000538070 TNFAIP1Q13829 316 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 TTLL12Q14166 644 aaPredicted RBP9.42□□□□□ -0.9
UBE3B-208ENST00000538070 PGM5Q15124 567 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 CLEC4DQ8WXI8 215 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 STK33Q9BYT3 514 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 DNAJC17Q9NVM6 304 aaKnown RBP9.42□□□□□ -0.9
UBE3B-208ENST00000538070 TSKSQ9UJT2 592 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 FRMPD4Q14CM0 1322 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 SLC16A3O15427 465 aaKnown RBP9.42□□□□□ -0.9
UBE3B-208ENST00000538070 KCNA3P22001 575 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 IFFO1Q0D2I5 559 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 SNX1Q13596 522 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 ANKRD35Q8N283 1001 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 FAM118BQ9BPY3 351 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 PDCD2LQ9BRP1 358 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 GOLGA6L10A6NI86 522 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 AGPSO00116 658 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 TRIM66O15016 1216 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 WDR46O15213 610 aaKnown RBP9.42□□□□□ -0.9
UBE3B-208ENST00000538070 PTGER2P43116 358 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 MARCKSL1P49006 195 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 MARSP56192 900 aaKnown RBP9.42□□□□□ -0.9
UBE3B-208ENST00000538070 MAPK7Q13164 816 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 NNTQ13423 1086 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 DAB2IPQ5VWQ8 1189 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 LLGL2Q6P1M3 1020 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 SLC47A2Q86VL8 602 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 CWC15Q9P013 229 aaKnown RBP9.42□□□□□ -0.9
UBE3B-208ENST00000538070 LCMT1Q9UIC8 334 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 USTQ9Y2C2 406 aa9.42□□□□□ -0.9
UBE3B-208ENST00000538070 ZNF831Q5JPB2 1677 aa9.41□□□□□ -0.9
UBE3B-208ENST00000538070 NPM3O75607 178 aaKnown RBP9.41□□□□□ -0.9
UBE3B-208ENST00000538070 ADRB2P07550 413 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms