RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ZNF577Q9BSK1 485 aa12.61□□□□□ -0.39
CLPB-208ENST00000538021 PIDD1Q9HB75 910 aa12.61□□□□□ -0.39
CLPB-208ENST00000538021 USP18Q9UMW8 372 aa12.61□□□□□ -0.39
CLPB-208ENST00000538021 SAMM50Q9Y512 469 aa12.61□□□□□ -0.39
CLPB-208ENST00000538021 MYH9P35579 1960 aaKnown RBP12.61□□□□□ -0.39
CLPB-208ENST00000538021 MAP1BP46821 2468 aaKnown RBP12.6□□□□□ -0.39
CLPB-208ENST00000538021 MEIS3P2A8K0S8 358 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 FAM86B1E9PN63 330 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 IPO5O00410 1097 aaKnown RBP12.6□□□□□ -0.39
CLPB-208ENST00000538021 SPTLC1O15269 473 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 LAMTOR5O43504 91 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 PRC1O43663 620 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 LILRB3O75022 631 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 OFD1O75665 1012 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 URODP06132 367 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 ADH1AP07327 375 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 FAM86B2P0C5J1 330 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 CALM1P0DP23 149 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 CALM2P0DP24 149 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 CALM3P0DP25 149 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 SKIP12755 728 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 SREBF1P36956 1147 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 ADCY7P51828 1080 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 LMNB2Q03252 620 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 CSTF1Q05048 431 aaKnown RBP12.6□□□□□ -0.39
CLPB-208ENST00000538021 TYW1BQ6NUM6 668 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 SHDQ96IW2 340 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 FAM167AQ96KS9 214 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 FAM193BQ96PV7 902 aaPredicted RBP12.6□□□□□ -0.39
CLPB-208ENST00000538021 BCO2Q9BYV7 579 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 GCOM2Q9BZD3 368 aaPredicted RBP12.6□□□□□ -0.39
CLPB-208ENST00000538021 RIC8AQ9NPQ8 531 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 CHST12Q9NRB3 414 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 DPP7Q9UHL4 492 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 PIN4Q9Y237 131 aaKnown RBP12.6□□□□□ -0.39
CLPB-208ENST00000538021 PCDHA10Q9Y5I2 948 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 NUMBLQ9Y6R0 609 aa12.6□□□□□ -0.39
CLPB-208ENST00000538021 B4GALT3O60512 393 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 GLUD1P00367 558 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 ALDH2P05091 517 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 ADRB1P08588 477 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 SPATA31D3P0C874 917 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 LAMP2P13473 410 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 ZNF528Q3MIS6 628 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 ZNF746Q6NUN9 644 aaPredicted RBP12.59□□□□□ -0.39
CLPB-208ENST00000538021 CYP26C1Q6V0L0 522 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 SPATA31D4Q6ZUB0 917 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 TMTC3Q6ZXV5 915 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 NIPA1Q7RTP0 329 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 SMAP1Q8IYB5 467 aaPredicted RBP12.59□□□□□ -0.39
CLPB-208ENST00000538021 TMTC2Q8N394 836 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 URGCPQ8TCY9 931 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 RTKNQ9BST9 563 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 SLC2A4RGQ9NR83 387 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 NRBP2Q9NSY0 501 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 TBC1D22BQ9NU19 505 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 FAM105AQ9NUU6 356 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLPB-208ENST00000538021 FBXO4Q9UKT5 387 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 SMG5Q9UPR3 1016 aaKnown RBP12.59□□□□□ -0.39
CLPB-208ENST00000538021 FAN1Q9Y2M0 1017 aa12.59□□□□□ -0.39
CLPB-208ENST00000538021 KANSL1LA0AUZ9 987 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 SMCO2A6NFE2 343 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 SH2B2O14492 632 aaPredicted RBP12.58□□□□□ -0.4
CLPB-208ENST00000538021 TEX28O15482 410 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 DDHD2O94830 711 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 SOD2P04179 222 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 OATP04181 439 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 SFPQP23246 707 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLPB-208ENST00000538021 STARD6P59095 220 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 GPC5P78333 572 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 NUCB1Q02818 461 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 AP3B2Q13367 1082 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 SNW1Q13573 536 aaKnown RBP12.58□□□□□ -0.4
CLPB-208ENST00000538021 HTR4Q13639 388 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 UBXN2BQ14CS0 331 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 JAKMIP3Q5VZ66 844 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 FANCBQ8NB91 859 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 PHKBQ93100 1093 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 BORCS6Q96GS4 357 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 RPS6KC1Q96S38 1066 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 RPP25Q9BUL9 199 aaKnown RBP12.58□□□□□ -0.4
CLPB-208ENST00000538021 SSX2IPQ9Y2D8 614 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 PCDHGA2Q9Y5H1 932 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 SLC12A7Q9Y666 1083 aa12.58□□□□□ -0.4
CLPB-208ENST00000538021 DOCK8Q8NF50 2099 aa12.57□□□□□ -0.4
CLPB-208ENST00000538021 IGLV3-22A0A075B6J6 115 aa12.57□□□□□ -0.4
CLPB-208ENST00000538021 A0A087WZ62 844 aa12.57□□□□□ -0.4
CLPB-208ENST00000538021 ANHXE9PGG2 379 aa12.57□□□□□ -0.4
CLPB-208ENST00000538021 NRP1O14786 923 aa12.57□□□□□ -0.4
CLPB-208ENST00000538021 DRP2Q13474 957 aa12.57□□□□□ -0.4
CLPB-208ENST00000538021 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
CLPB-208ENST00000538021 TAS1R1Q7RTX1 841 aa12.57□□□□□ -0.4
CLPB-208ENST00000538021 MICU3Q86XE3 530 aa12.57□□□□□ -0.4
CLPB-208ENST00000538021 PALB2Q86YC2 1186 aa12.57□□□□□ -0.4
CLPB-208ENST00000538021 RUFY2Q8WXA3 655 aa12.57□□□□□ -0.4
CLPB-208ENST00000538021 ZNF707Q96C28 371 aaPredicted RBP12.57□□□□□ -0.4
CLPB-208ENST00000538021 PGBD4Q96DM1 585 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms