RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 INPP5FQ9Y2H2 1132 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 PPME1Q9Y570 386 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 COL4A3BPQ9Y5P4 624 aa10.84□□□□□ -0.67
CHD4-207ENST00000537634 MUC6Q6W4X9 2439 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 NT5C1B-RDH14C9J2C7 533 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 GAS2O43903 313 aaKnown RBP10.83□□□□□ -0.68
CHD4-207ENST00000537634 BAG4O95429 457 aaKnown RBP10.83□□□□□ -0.68
CHD4-207ENST00000537634 HOXB8P17481 243 aaPredicted RBP10.83□□□□□ -0.68
CHD4-207ENST00000537634 YWHABP31946 246 aaKnown RBP10.83□□□□□ -0.68
CHD4-207ENST00000537634 KRT2P35908 639 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 RFC5P40937 340 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 AK2P54819 239 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 RNASELQ05823 741 aaKnown RBP10.83□□□□□ -0.68
CHD4-207ENST00000537634 KCNC3Q14003 757 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 EPHA7Q15375 998 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 LONRF3Q496Y0 759 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 TPRNQ4KMQ1 711 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 NOMO2Q5JPE7 1267 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 NCAPH2Q6IBW4 605 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 OTUD6AQ7L8S5 288 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 SLFN12Q8IYM2 578 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 TMEM87AQ8NBN3 555 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 EDAQ92838 391 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 HAS1Q92839 578 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 CASP10Q92851 521 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 LPPQ93052 612 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 PGBD4Q96DM1 585 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 MFSD14AQ96MC6 490 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 APOL5Q9BWW9 433 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 DHX33Q9H6R0 707 aaKnown RBP10.83□□□□□ -0.68
CHD4-207ENST00000537634 BMP2KQ9NSY1 1161 aaPredicted RBP10.83□□□□□ -0.68
CHD4-207ENST00000537634 AGPAT5Q9NUQ2 364 aa10.83□□□□□ -0.68
CHD4-207ENST00000537634 WRAP73Q9P2S5 460 aaPredicted RBP10.83□□□□□ -0.68
CHD4-207ENST00000537634 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.82□□□□□ -0.68
CHD4-207ENST00000537634 C2orf71A6NGG8 1288 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 DTNBO60941 627 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 CTDNEP1O95476 244 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 SRGAP2CP0DJJ0 459 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 CYP4A11Q02928 519 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 EMC2Q15006 297 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 XKR9Q5GH70 373 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 SYCE2Q6PIF2 218 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 SRGAP1Q7Z6B7 1085 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 C4orf19Q8IY42 314 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 VPS52Q8N1B4 723 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 MRPL43Q8N983 215 aaKnown RBP10.82□□□□□ -0.68
CHD4-207ENST00000537634 ZNF579Q8NAF0 562 aaKnown RBP10.82□□□□□ -0.68
CHD4-207ENST00000537634 URGCPQ8TCY9 931 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 TCP11Q8WWU5 503 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 PRPF31Q8WWY3 499 aaKnown RBP10.82□□□□□ -0.68
CHD4-207ENST00000537634 TMEM143Q96AN5 459 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 DYDC2Q96IM9 177 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 GBP3Q9H0R5 595 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 S1PR5Q9H228 398 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 KCNH6Q9H252 994 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 ZSWIM4Q9H7M6 989 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 IFT122Q9HBG6 1241 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 TBC1D13Q9NVG8 400 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 RGL1Q9NZL6 768 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 PCDHB2Q9Y5E7 798 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 HCFC2Q9Y5Z7 792 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 TECTAO75443 2155 aa10.82□□□□□ -0.68
CHD4-207ENST00000537634 FAM205CA6NFA0 338 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 TMEM221A6NGB7 291 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 MEIS3P2A8K0S8 358 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 M0R296 226 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 ZNF623O75123 536 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 ERLIN2O94905 339 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 CXCL14O95715 111 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 SP100P23497 879 aaPredicted RBP10.81□□□□□ -0.68
CHD4-207ENST00000537634 ZXDAP98168 799 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 LAMTOR4Q0VGL1 99 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 NR5A1Q13285 461 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 GIT2Q14161 759 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 CTTNQ14247 550 aaKnown RBP10.81□□□□□ -0.68
CHD4-207ENST00000537634 EARS2Q5JPH6 523 aaKnown RBP10.81□□□□□ -0.68
CHD4-207ENST00000537634 CES5AQ6NT32 575 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 TRIM67Q6ZTA4 783 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 ZBTB33Q86T24 672 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 TMEM173Q86WV6 379 aaPredicted RBP10.81□□□□□ -0.68
CHD4-207ENST00000537634 TPH2Q8IWU9 490 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 NECAB1Q8N987 351 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 RNF149Q8NC42 400 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 GTF3C6Q969F1 213 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 IGSF21Q96ID5 467 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 CCDC43Q96MW1 224 aaKnown RBP10.81□□□□□ -0.68
CHD4-207ENST00000537634 MTRQ99707 1265 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 ZBP1Q9H171 429 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 NRDE2Q9H7Z3 1164 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 RSAD1Q9HA92 442 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 CNTNAP2Q9UHC6 1331 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 ZNF318Q5VUA4 2279 aa10.81□□□□□ -0.68
CHD4-207ENST00000537634 ASAP2O43150 1006 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 CLASP2O75122 1294 aaKnown RBP10.8□□□□□ -0.68
CHD4-207ENST00000537634 OFD1O75665 1012 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 GALTP07902 379 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 CTSAP10619 480 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 FDPSP14324 419 aaKnown RBP10.8□□□□□ -0.68
CHD4-207ENST00000537634 ITIH3Q06033 890 aa10.8□□□□□ -0.68
CHD4-207ENST00000537634 SPIRE1Q08AE8 756 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms