RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TTLL13PA6NNM8 815 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 TGFB1I1O43294 461 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 GNAT1P11488 350 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 GPC3P51654 580 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 NLRP11P59045 1033 aaKnown RBP17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 MYL5Q02045 173 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 PPP2R5AQ15172 486 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 PTGISQ16647 500 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 KNOP1Q1ED39 458 aaKnown RBP17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 CDCA2Q69YH5 1023 aaPredicted RBP17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 SLC43A3Q8NBI5 491 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 DHX38Q92620 1227 aaKnown RBP17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 MAP7D2Q96T17 732 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 GTPBP4Q9BZE4 634 aaKnown RBP17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 SENP6Q9GZR1 1112 aaPredicted RBP17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 ADAMTS10Q9H324 1103 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 IFT122Q9HBG6 1241 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 GINS2Q9Y248 185 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 PCDHB13Q9Y5F0 798 aa17.22■□□□□ 0.35
SFSWAP-206ENST00000537582 A0A0U1RQG5 324 aaPredicted RBP17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 B4GALT4O60513 344 aa17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 GPR32O75388 356 aa17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 IQCF3P0C7M6 154 aa17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 GJA8P48165 433 aa17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 ATN1P54259 1190 aaPredicted RBP17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 SERINC5Q86VE9 423 aa17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 ENOX1Q8TC92 643 aaKnown RBP17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 NLRP7Q8WX94 980 aa17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 CCDC113Q9H0I3 377 aa17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 SAMSN1Q9NSI8 373 aaKnown RBP17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 FANCLQ9NW38 375 aa17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 NFE2L3Q9Y4A8 694 aa17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 KAT6AQ92794 2004 aa17.21■□□□□ 0.35
SFSWAP-206ENST00000537582 GOLGA6L3A6NEY3 463 aa17.2■□□□□ 0.34
SFSWAP-206ENST00000537582 ANKRD63C9JTQ0 380 aa17.2■□□□□ 0.34
SFSWAP-206ENST00000537582 ARVCFO00192 962 aa17.2■□□□□ 0.34
SFSWAP-206ENST00000537582 CAVIN2O95810 425 aa17.2■□□□□ 0.34
SFSWAP-206ENST00000537582 PTENP60484 403 aa17.2■□□□□ 0.34
SFSWAP-206ENST00000537582 SLC39A4Q6P5W5 647 aa17.2■□□□□ 0.34
SFSWAP-206ENST00000537582 MAP4K3Q8IVH8 894 aa17.2■□□□□ 0.34
SFSWAP-206ENST00000537582 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
SFSWAP-206ENST00000537582 ACCSQ96QU6 501 aa17.2■□□□□ 0.34
SFSWAP-206ENST00000537582 UBE4BO95155 1302 aa17.2■□□□□ 0.34
SFSWAP-206ENST00000537582 BECN2A8MW95 431 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 CLIC2O15247 247 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 ASAP2O43150 1006 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 B4GALT5O43286 388 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 CTSHP09668 335 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 FGFR4P22455 802 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 PPP1R2P41236 205 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 MBTD1Q05BQ5 628 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 TFDP1Q14186 410 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 CT47A1Q5JQC4 288 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 SPATA1Q5VX52 437 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 STXBP4Q6ZWJ1 553 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 SYCP3Q8IZU3 236 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 TMEM40Q8WWA1 233 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 OSMRQ99650 979 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 SIP14410 1827 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 INO80B-WBP1J3KQ70 363 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 K7ERI5 159 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 IKBKBO14920 756 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 AP5Z1O43299 807 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 ATP1A3P13637 1013 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 CDK7P50613 346 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 ALCAMQ13740 583 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 TAF2Q6P1X5 1199 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 LRRC55Q6ZSA7 311 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 SLC17A8Q8NDX2 589 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 OSBPL7Q9BZF2 842 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 INO80BQ9C086 356 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 AGPAT3Q9NRZ7 376 aa17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 TYW1Q9NV66 732 aaKnown RBP17.19■□□□□ 0.34
SFSWAP-206ENST00000537582 PHLPP2Q6ZVD8 1323 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 KIF20AO95235 890 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 COL6A1P12109 1028 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 PHKA2P46019 1235 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 PTPN11Q06124 597 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 TRIM71Q2Q1W2 868 aaKnown RBP17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 IRF2BP1Q8IU81 584 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 ZBTB8OSQ8IWT0 167 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 CSGALNACT2Q8N6G5 542 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 ZSWIM2Q8NEG5 633 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 HVCN1Q96D96 273 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 CBWD1Q9BRT8 395 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 TARS2Q9BW92 718 aaKnown RBP17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 SRRTQ9BXP5 876 aaKnown RBP17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 GBP3Q9H0R5 595 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 TMEM134Q9H6X4 195 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 GRPEL1Q9HAV7 217 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 TRAF3IP3Q9Y228 551 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 NOD1Q9Y239 953 aa17.18■□□□□ 0.34
SFSWAP-206ENST00000537582 BICDL2A1A5D9 508 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 SMTNL1A8MU46 457 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 GOLGA6L19H0YKK7 550 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 PDXKO00764 312 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 PRKCBP05771 671 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 ADSSP30520 456 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 THPOP40225 353 aa17.17■□□□□ 0.34
SFSWAP-206ENST00000537582 LRRC63Q05C16 580 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 421.7 ms