RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ZNF473Q8WTR7 871 aaKnown RBP15.51■□□□□ 0.07
USP44-203ENST00000537435 AGPAT1Q99943 283 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 PKD2L1Q9P0L9 805 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 BCCIPQ9P287 314 aaKnown RBP eCLIP15.51■□□□□ 0.07
USP44-203ENST00000537435 DAAM1Q9Y4D1 1078 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 TISP43B9A030 160 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 RFX1P22670 979 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 CHRNA5P30532 468 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 COPB2P35606 906 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 PTENP60484 403 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 PPARDQ03181 441 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 DHX9Q08211 1270 aaKnown RBP15.5■□□□□ 0.07
USP44-203ENST00000537435 EMSYQ7Z589 1322 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 LDHDQ86WU2 507 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 SLC20A1Q8WUM9 679 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 MXRA8Q9BRK3 442 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 VCPKMTQ9H867 229 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 UBE2TQ9NPD8 197 aaPredicted RBP15.5■□□□□ 0.07
USP44-203ENST00000537435 FBXO28Q9NVF7 368 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 ERLIN2O94905 339 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 BCRP11274 1271 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 BIRC3Q13489 604 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 MYBPC2Q14324 1141 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 NLRP14Q86W24 1093 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 MYCBPAPQ8TBZ2 947 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 ATP8B4Q8TF62 1192 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 CCT8L2Q96SF2 557 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 RAB17Q9H0T7 212 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 ERVK-5Q9HDB9 667 aa15.5■□□□□ 0.07
USP44-203ENST00000537435 ZNF646O15015 1829 aaPredicted RBP15.49■□□□□ 0.07
USP44-203ENST00000537435 VGLL3A8MV65 326 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 ITGB5P18084 799 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 INPP5BP32019 993 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 MIER3Q7Z3K6 550 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 ARHGEF19Q8IW93 802 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 NEK9Q8TD19 979 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 ALG3Q92685 438 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 NAP1L3Q99457 506 aaPredicted RBP15.49■□□□□ 0.07
USP44-203ENST00000537435 RIT2Q99578 217 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 TMOD4Q9NZQ9 345 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 LARSQ9P2J5 1176 aaKnown RBP15.49■□□□□ 0.07
USP44-203ENST00000537435 GOLGA6L10A0A0M3HER8 536 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 E7EVH7 732 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 VAMP7P51809 220 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 DR1Q01658 176 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 PPP3CAQ08209 521 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 INTS8Q75QN2 995 aaKnown RBP15.49■□□□□ 0.07
USP44-203ENST00000537435 FAM160B2Q86V87 743 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 RHOT2Q8IXI1 618 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 FMO2Q99518 471 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 PPANQ9NQ55 473 aaKnown RBP15.49■□□□□ 0.07
USP44-203ENST00000537435 ALG6Q9Y672 507 aa15.49■□□□□ 0.07
USP44-203ENST00000537435 RBBP6Q7Z6E9 1792 aaKnown RBP15.48■□□□□ 0.07
USP44-203ENST00000537435 SPDYE2BA6NHP3 402 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 PPIP5K2O43314 1243 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 SPDYE6P0CI01 402 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 GRIPAP1Q4V328 841 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 AGBL2Q5U5Z8 902 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 SPATS2Q86XZ4 545 aaKnown RBP15.48■□□□□ 0.07
USP44-203ENST00000537435 CBWD1Q9BRT8 395 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 TMEM206Q9H813 350 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 CTTNBP2NLQ9P2B4 639 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 SLC12A6Q9UHW9 1150 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 NOVA2Q9UNW9 492 aaKnown RBP15.48■□□□□ 0.07
USP44-203ENST00000537435 ATXN2Q99700 1313 aaKnown RBP15.48■□□□□ 0.07
USP44-203ENST00000537435 KIAA0754O94854 1291 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 FTLP02792 175 aaPredicted RBP15.48■□□□□ 0.07
USP44-203ENST00000537435 GCLMP48507 274 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 CETN1Q12798 172 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 PPP2R5EQ16537 467 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 ODF2Q5BJF6 829 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 AADACL2Q6P093 401 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 RPUSD2Q8IZ73 545 aaKnown RBP15.48■□□□□ 0.07
USP44-203ENST00000537435 FLAD1Q8NFF5 587 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 FAM151AQ8WW52 585 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 GLG1Q92896 1179 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 PAGR1Q9BTK6 254 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 ZNF70Q9UC06 446 aaPredicted RBP15.48■□□□□ 0.07
USP44-203ENST00000537435 ATP8A1Q9Y2Q0 1164 aa15.48■□□□□ 0.07
USP44-203ENST00000537435 SRRM3A6NNA2 597 aaPredicted RBP15.47■□□□□ 0.07
USP44-203ENST00000537435 MEFVO15553 781 aaPredicted RBP15.47■□□□□ 0.07
USP44-203ENST00000537435 FAM107AO95990 144 aa15.47■□□□□ 0.07
USP44-203ENST00000537435 P4HBP07237 508 aaKnown RBP15.47■□□□□ 0.07
USP44-203ENST00000537435 VCAM1P19320 739 aa15.47■□□□□ 0.07
USP44-203ENST00000537435 KRT71Q3SY84 523 aa15.47■□□□□ 0.07
USP44-203ENST00000537435 EPC2Q52LR7 807 aa15.47■□□□□ 0.07
USP44-203ENST00000537435 DUPD1Q68J44 220 aa15.47■□□□□ 0.07
USP44-203ENST00000537435 CNKSR1Q969H4 720 aa15.47■□□□□ 0.07
USP44-203ENST00000537435 ERP44Q9BS26 406 aa15.47■□□□□ 0.07
USP44-203ENST00000537435 GLIS2Q9BZE0 524 aaPredicted RBP15.47■□□□□ 0.07
USP44-203ENST00000537435 KCNH7Q9NS40 1196 aa15.47■□□□□ 0.07
USP44-203ENST00000537435 ZHX2Q9Y6X8 837 aa15.47■□□□□ 0.07
USP44-203ENST00000537435 PLA2G6O60733 806 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 PPFIA2O75334 1257 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 TMOD1P28289 359 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 HADHBP55084 474 aaKnown RBP15.46■□□□□ 0.07
USP44-203ENST00000537435 PPP2R2AP63151 447 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 ZNF746Q6NUN9 644 aaPredicted RBP15.46■□□□□ 0.07
USP44-203ENST00000537435 MICALCLQ6ZW33 695 aa15.46■□□□□ 0.07
USP44-203ENST00000537435 CDAN1Q8IWY9 1227 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms