RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 B3GNT9Q6UX72 402 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 RNF135Q8IUD6 432 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 TCP11Q8WWU5 503 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 PSPC1Q8WXF1 523 aaKnown RBP11□□□□□ -0.65
CCDC170-202ENST00000537358 PGBD4Q96DM1 585 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 MFSD14AQ96MC6 490 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 CCDC43Q96MW1 224 aaKnown RBP11□□□□□ -0.65
CCDC170-202ENST00000537358 FDXACB1Q9BRP7 624 aaPredicted RBP11□□□□□ -0.65
CCDC170-202ENST00000537358 PHF7Q9BWX1 381 aaPredicted RBP11□□□□□ -0.65
CCDC170-202ENST00000537358 KCNMB3Q9NPA1 279 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 HCSTQ9UBK5 93 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 USP15Q9Y4E8 981 aaPredicted RBP11□□□□□ -0.65
CCDC170-202ENST00000537358 PCDHGC5Q9Y5F6 944 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 COL4A3BPQ9Y5P4 624 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 C5orf42Q9H799 3197 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 TMEM150BA6NC51 233 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 ZC3H11AO75152 810 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCDC170-202ENST00000537358 GLP2RO95838 553 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 ATF7P17544 494 aaPredicted RBP10.99□□□□□ -0.65
CCDC170-202ENST00000537358 RFC5P40937 340 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 TECP42680 631 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 PHKA2P46019 1235 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 NCBP1Q09161 790 aaKnown RBP10.99□□□□□ -0.65
CCDC170-202ENST00000537358 DRP2Q13474 957 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 GIT2Q14161 759 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 EPHA7Q15375 998 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 NPY5RQ15761 445 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 TPRNQ4KMQ1 711 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 HERC4Q5GLZ8 1057 aaPredicted RBP10.99□□□□□ -0.65
CCDC170-202ENST00000537358 CLLU1OSQ5K130 101 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 PLA2G4FQ68DD2 849 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 NCAPH2Q6IBW4 605 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 CES5AQ6NT32 575 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 LRRC55Q6ZSA7 311 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 ANO5Q75V66 913 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 ZNF598Q86UK7 904 aaKnown RBP10.99□□□□□ -0.65
CCDC170-202ENST00000537358 URGCPQ8TCY9 931 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 CASP10Q92851 521 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 SH2D3AQ9BRG2 576 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 LXNQ9BS40 222 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 TRAIPQ9BWF2 469 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 KCNH6Q9H252 994 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 ZSWIM4Q9H7M6 989 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 FAM105AQ9NUU6 356 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 RNF19AQ9NV58 838 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 STK39Q9UEW8 545 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 MUTYHQ9UIF7 546 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 TPCN1Q9ULQ1 816 aa10.99□□□□□ -0.65
CCDC170-202ENST00000537358 ASAP2O43150 1006 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 YWHABP31946 246 aaKnown RBP10.98□□□□□ -0.65
CCDC170-202ENST00000537358 PBX3P40426 434 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 BCAR1P56945 870 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 NOMO2Q5JPE7 1267 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 ANKRD54Q6NXT1 300 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 LLGL2Q6P1M3 1020 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 TMEM184AQ6ZMB5 413 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 SRGAP1Q7Z6B7 1085 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 C4orf19Q8IY42 314 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 SLC39A11Q8N1S5 342 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 RPGRIP1Q96KN7 1286 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 FAM193BQ96PV7 902 aaPredicted RBP10.98□□□□□ -0.65
CCDC170-202ENST00000537358 CEP89Q96ST8 783 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 PPP4R2Q9NY27 417 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 VAV3Q9UKW4 847 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 INPP5FQ9Y2H2 1132 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 NR2E1Q9Y466 385 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 ARID2Q68CP9 1835 aa10.98□□□□□ -0.65
CCDC170-202ENST00000537358 HIDE1A8MVS5 230 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 LOC730098B7Z3J9 87 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 EML1O00423 815 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 ZNF623O75123 536 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 ERLIN2O94905 339 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 STBD1O95210 358 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 SRGAP2CP0DJJ0 459 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 AK2P54819 239 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 NPEPPSP55786 919 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 ITIH3Q06033 890 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 TFDP1Q14186 410 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 MXD4Q14582 209 aaPredicted RBP10.97□□□□□ -0.65
CCDC170-202ENST00000537358 CBX2Q14781 532 aaPredicted RBP10.97□□□□□ -0.65
CCDC170-202ENST00000537358 PCBP1Q15365 356 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCDC170-202ENST00000537358 XKR9Q5GH70 373 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 ERICH6BQ5W0A0 696 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 ZBTB33Q86T24 672 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 KSR1Q8IVT5 923 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 TPH2Q8IWU9 490 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 VPS52Q8N1B4 723 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 MRPL43Q8N983 215 aaKnown RBP10.97□□□□□ -0.65
CCDC170-202ENST00000537358 CNNM3Q8NE01 707 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 PRPF31Q8WWY3 499 aaKnown RBP10.97□□□□□ -0.65
CCDC170-202ENST00000537358 EDAQ92838 391 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 NECTIN4Q96NY8 510 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 MTRQ99707 1265 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 DHX33Q9H6R0 707 aaKnown RBP10.97□□□□□ -0.65
CCDC170-202ENST00000537358 AGPAT5Q9NUQ2 364 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 KANSL3Q9P2N6 904 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 PCDHA12Q9UN75 941 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 PCDHB2Q9Y5E7 798 aa10.97□□□□□ -0.65
CCDC170-202ENST00000537358 CNTNAP2Q9UHC6 1331 aa10.96□□□□□ -0.65
CCDC170-202ENST00000537358 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms