RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 VSIG10LQ86VR7 867 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 CMTR1Q8N1G2 835 aaKnown RBP8.08□□□□□ -1.12
YBX3-206ENST00000536823 GALNT11Q8NCW6 608 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 PPTC7Q8NI37 304 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 CUL5Q93034 780 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 JAKMIP1Q96N16 626 aaKnown RBP8.08□□□□□ -1.12
YBX3-206ENST00000536823 INPP4AQ96PE3 977 aaPredicted RBP8.08□□□□□ -1.12
YBX3-206ENST00000536823 NOC4LQ9BVI4 516 aaKnown RBP8.08□□□□□ -1.12
YBX3-206ENST00000536823 MUC3BQ9H195 1237 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 TRPV6Q9H1D0 765 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 RBSNQ9H1K0 784 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 HIPK3Q9H422 1215 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 RBM28Q9NW13 759 aaKnown RBP8.08□□□□□ -1.12
YBX3-206ENST00000536823 DDX41Q9UJV9 622 aaKnown RBP8.08□□□□□ -1.12
YBX3-206ENST00000536823 BRPF3Q9ULD4 1205 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 SNX14Q9Y5W7 946 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 PRUNE2Q8WUY3 3088 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 NID2Q14112 1375 aa8.08□□□□□ -1.12
YBX3-206ENST00000536823 KLF18A0A0U1RQI7 1052 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 hCG_1642624A0A1W2PR95 340 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 MEIS2O14770 477 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 EPB41L2O43491 1005 aaKnown RBP8.07□□□□□ -1.12
YBX3-206ENST00000536823 STAM2O75886 525 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 CENPBP07199 599 aaPredicted RBP8.07□□□□□ -1.12
YBX3-206ENST00000536823 SUPT20HL2P0C7V6 817 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 TGFB3P10600 412 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 HOXD8P13378 290 aaPredicted RBP8.07□□□□□ -1.12
YBX3-206ENST00000536823 UBA1P22314 1058 aaKnown RBP8.07□□□□□ -1.12
YBX3-206ENST00000536823 CYP2C18P33260 490 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 SERPINB4P48594 390 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 DGKDQ16760 1214 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 XRRA1Q6P2D8 792 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 KCNV1Q6PIU1 500 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 USP17L6PQ6QN14 398 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 BLOC1S2Q6QNY1 142 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 CBLL1Q75N03 491 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 DHX37Q8IY37 1157 aaKnown RBP8.07□□□□□ -1.12
YBX3-206ENST00000536823 TMEM199Q8N511 208 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 SMARCC2Q8TAQ2 1214 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 RNPC3Q96LT9 517 aaKnown RBP8.07□□□□□ -1.12
YBX3-206ENST00000536823 FAM83CQ9BQN1 747 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 PPME1Q9Y570 386 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 CDH23Q9H251 3354 aa8.07□□□□□ -1.12
YBX3-206ENST00000536823 UMODL1Q5DID0 1318 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 TTC28Q96AY4 2481 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 SOWAHDA6NJG2 315 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 WDR64B1ANS9 1081 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 GGPS1O95749 300 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 F2P00734 622 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 CPA1P15085 419 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 CSF2RAP15509 400 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 CASTP20810 708 aaKnown RBP8.06□□□□□ -1.12
YBX3-206ENST00000536823 RPS6KB1P23443 525 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 ICAM3P32942 547 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 MRPS9P82933 396 aaKnown RBP8.06□□□□□ -1.12
YBX3-206ENST00000536823 SMAD3P84022 425 aaKnown RBP8.06□□□□□ -1.12
YBX3-206ENST00000536823 FGD1P98174 961 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 PTPN11Q06124 597 aaPredicted RBP8.06□□□□□ -1.12
YBX3-206ENST00000536823 UBE2SQ16763 222 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 GNPTABQ3T906 1256 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 FBLN7Q53RD9 439 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 FAM47CQ5HY64 1035 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 TMEM240Q5SV17 173 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 CELF3Q5SZQ8 465 aaKnown RBP8.06□□□□□ -1.12
YBX3-206ENST00000536823 TMCO4Q5TGY1 634 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 PCNX4Q63HM2 1172 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 WWC2Q6AWC2 1192 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 FAM109BQ6ICB4 259 aaPredicted RBP8.06□□□□□ -1.12
YBX3-206ENST00000536823 PSRC1Q6PGN9 363 aaPredicted RBP8.06□□□□□ -1.12
YBX3-206ENST00000536823 CAPN12Q6ZSI9 719 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 Q7L0L9 218 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 HEATR3Q7Z4Q2 680 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 SESTD1Q86VW0 696 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 TEX2Q8IWB9 1127 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 FAM20CQ8IXL6 584 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 FBXL16Q8N461 479 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 DEFB123Q8N688 67 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 KAT2BQ92831 832 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 BRF1Q92994 677 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 NSUN5Q96P11 429 aaKnown RBP8.06□□□□□ -1.12
YBX3-206ENST00000536823 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.06□□□□□ -1.122e-23■□□□□ 10.4
YBX3-206ENST00000536823 AGXT2Q9BYV1 514 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 WNT8AQ9H1J5 351 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 KCNF1Q9H3M0 494 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 PSTPIP2Q9H939 334 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.06□□□□□ -1.12
YBX3-206ENST00000536823 TRMT13Q9NUP7 481 aaKnown RBP8.06□□□□□ -1.12
YBX3-206ENST00000536823 SEPT3Q9UH03 358 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 TRIM33Q9UPN9 1127 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 TET1Q8NFU7 2136 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 TANC1Q9C0D5 1861 aa8.06□□□□□ -1.12
YBX3-206ENST00000536823 DOCK5Q9H7D0 1870 aa8.05□□□□□ -1.12
YBX3-206ENST00000536823 TRIP12Q14669 1992 aaPredicted RBP8.05□□□□□ -1.12
YBX3-206ENST00000536823 hCG_1984214I3L0E3 225 aa8.05□□□□□ -1.12
YBX3-206ENST00000536823 STXBP3O00186 592 aa8.05□□□□□ -1.12
YBX3-206ENST00000536823 HAS3O00219 553 aa8.05□□□□□ -1.12
YBX3-206ENST00000536823 FIBPO43427 364 aa8.05□□□□□ -1.12
YBX3-206ENST00000536823 PSAPP07602 524 aa8.05□□□□□ -1.12
YBX3-206ENST00000536823 ZNF286BP0CG31 522 aa8.05□□□□□ -1.12
YBX3-206ENST00000536823 CYP2C9P11712 490 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms