RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ZXDAP98168 799 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 LONRF3Q496Y0 759 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 GLB1LQ6UWU2 654 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 LPPQ93052 612 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 CEP170P1Q96L14 293 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 FBXL18Q96ME1 805 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 APOL5Q9BWW9 433 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 IFT122Q9HBG6 1241 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 TPCN1Q9ULQ1 816 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 PPME1Q9Y570 386 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 COL4A3BPQ9Y5P4 624 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 ZNF623O75123 536 aa22.02■■□□□ 1.12
TNFRSF1B-204ENST00000536782 ZC3H11AO75152 810 aaKnown RBP eCLIP22.02■■□□□ 1.12
TNFRSF1B-204ENST00000536782 CA8P35219 290 aa22.02■■□□□ 1.12
TNFRSF1B-204ENST00000536782 POLGP54098 1239 aaPredicted RBP22.02■■□□□ 1.12
TNFRSF1B-204ENST00000536782 BMP8AQ7Z5Y6 402 aa22.02■■□□□ 1.12
TNFRSF1B-204ENST00000536782 ALYREFQ86V81 257 aaKnown RBP22.02■■□□□ 1.12
TNFRSF1B-204ENST00000536782 OXER1Q8TDS5 423 aa22.02■■□□□ 1.12
TNFRSF1B-204ENST00000536782 HAS1Q92839 578 aa22.02■■□□□ 1.12
TNFRSF1B-204ENST00000536782 GJB4Q9NTQ9 266 aa22.02■■□□□ 1.12
TNFRSF1B-204ENST00000536782 TMEM221A6NGB7 291 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 M0R296 226 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 RFC5P40937 340 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 EPHA7Q15375 998 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 TPRNQ4KMQ1 711 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 NOMO2Q5JPE7 1267 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 C4orf19Q8IY42 314 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 VPS52Q8N1B4 723 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 ZNF579Q8NAF0 562 aaKnown RBP22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 PRPF31Q8WWY3 499 aaKnown RBP22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 WASF1Q92558 559 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 PGBD4Q96DM1 585 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 LXNQ9BS40 222 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 DHX33Q9H6R0 707 aaKnown RBP22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 TBC1D13Q9NVG8 400 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 WRAP73Q9P2S5 460 aaPredicted RBP22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 INPP5FQ9Y2H2 1132 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 HCFC2Q9Y5Z7 792 aa22.01■■□□□ 1.11
TNFRSF1B-204ENST00000536782 CLASP2O75122 1294 aaKnown RBP22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 CXCL14O95715 111 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 YWHABP31946 246 aaKnown RBP22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 NHLH1Q02575 133 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 RNASELQ05823 741 aaKnown RBP22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 ANKRD1Q15327 319 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 ERICH6BQ5W0A0 696 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 NCAPH2Q6IBW4 605 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 OTUD6AQ7L8S5 288 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 SRGAP1Q7Z6B7 1085 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 POTEDQ86YR6 584 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 SLFN12Q8IYM2 578 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 PSPC1Q8WXF1 523 aaKnown RBP22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 TMEM143Q96AN5 459 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 PBXIP1Q96AQ6 731 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 NRDE2Q9H7Z3 1164 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 AGPAT5Q9NUQ2 364 aa22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 ORC3Q9UBD5 711 aaPredicted RBP22■■□□□ 1.11
TNFRSF1B-204ENST00000536782 MEIS3P2A8K0S8 358 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 DTNBO60941 627 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 OFD1O75665 1012 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 BAG4O95429 457 aaKnown RBP21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 CTDNEP1O95476 244 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 SRGAP2CP0DJJ0 459 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 ANAPC15P60006 121 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 ITIH3Q06033 890 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 CES5AQ6NT32 575 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 DDX53Q86TM3 631 aaKnown RBP21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 TMEM173Q86WV6 379 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 TMEM87AQ8NBN3 555 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 TCP11Q8WWU5 503 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 IGSF21Q96ID5 467 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 ZBP1Q9H171 429 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 RGL1Q9NZL6 768 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 PCDHB2Q9Y5E7 798 aa21.99■■□□□ 1.11
TNFRSF1B-204ENST00000536782 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 GAS2O43903 313 aaKnown RBP21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 GALTP07902 379 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 SIGLEC14Q08ET2 396 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 LAMTOR4Q0VGL1 99 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 GIT2Q14161 759 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 EARS2Q5JPH6 523 aaKnown RBP21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 URGCPQ8TCY9 931 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 DYDC2Q96IM9 177 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 GBP3Q9H0R5 595 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 ADAM7Q9H2U9 754 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 ZSWIM4Q9H7M6 989 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 BRMS1Q9HCU9 246 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 BMP2KQ9NSY1 1161 aaPredicted RBP21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 NR2E1Q9Y466 385 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 IRAK3Q9Y616 596 aa21.98■■□□□ 1.11
TNFRSF1B-204ENST00000536782 ASAP2O43150 1006 aa21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 CTSAP10619 480 aa21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 KRT2P35908 639 aa21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 AK2P54819 239 aa21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 SPIRE1Q08AE8 756 aa21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 CTTNQ14247 550 aaKnown RBP21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 EMC2Q15006 297 aa21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 PTPN21Q16825 1174 aa21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 XKR9Q5GH70 373 aa21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 MRPL10Q7Z7H8 261 aaKnown RBP21.97■■□□□ 1.11
TNFRSF1B-204ENST00000536782 AUTS2Q8WXX7 1259 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms