RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 KIAA1024Q9UPX6 916 aa14.09□□□□□ -0.15
DDB1-207ENST00000535967 DNM3Q9UQ16 869 aa14.09□□□□□ -0.15
DDB1-207ENST00000535967 TRPV2Q9Y5S1 764 aa14.09□□□□□ -0.15
DDB1-207ENST00000535967 ARHGEF35A5YM69 484 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 EYA4O95677 639 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 NCLP19338 710 aaKnown RBP14.08□□□□□ -0.15
DDB1-207ENST00000535967 CLCN3P51790 818 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 CDC42EP1Q00587 391 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 ECM1Q16610 540 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 LRRC71Q8N4P6 559 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 RASSF8Q8NHQ8 419 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 SPATA32Q96LK8 384 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 CLIC6Q96NY7 704 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 PNMA5Q96PV4 448 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 SH2D3AQ9BRG2 576 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 CCDC39Q9UFE4 941 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 AKT3Q9Y243 479 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 SQORQ9Y6N5 450 aa14.08□□□□□ -0.15
DDB1-207ENST00000535967 ZBTB39O15060 712 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 CXCL10P02778 98 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 CTSHP09668 335 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 KCNJ6P48051 423 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 ME1P48163 572 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 MBTPS1Q14703 1052 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 FAM43BQ6ZT52 329 aaPredicted RBP14.07□□□□□ -0.16
DDB1-207ENST00000535967 MCPH1Q8NEM0 835 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 LEO1Q8WVC0 666 aaPredicted RBP14.07□□□□□ -0.16
DDB1-207ENST00000535967 IPO9Q96P70 1041 aaKnown RBP14.07□□□□□ -0.16
DDB1-207ENST00000535967 CELF4Q9BZC1 486 aaKnown RBP14.07□□□□□ -0.16
DDB1-207ENST00000535967 BHMT2Q9H2M3 363 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 SUGCTQ9HAC7 445 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 STK17AQ9UEE5 414 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 CDY2AQ9Y6F7 541 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 LINC01553A4QN01 128 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 E9PMD0 336 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 USO1O60763 962 aaKnown RBP14.07□□□□□ -0.16
DDB1-207ENST00000535967 MLLT3P42568 568 aaPredicted RBP14.07□□□□□ -0.16
DDB1-207ENST00000535967 KARSQ15046 597 aaKnown RBP14.07□□□□□ -0.16
DDB1-207ENST00000535967 ZRSR1Q15695 479 aaKnown RBP14.07□□□□□ -0.16
DDB1-207ENST00000535967 TMEM31Q5JXX7 168 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 FAM117BQ6P1L5 589 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 PADI6Q6TGC4 694 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 ZNF410Q86VK4 478 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 PSPC1Q8WXF1 523 aaKnown RBP14.07□□□□□ -0.16
DDB1-207ENST00000535967 EPSTI1Q96J88 318 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 TIPINQ9BVW5 301 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 XPNPEP1Q9NQW7 623 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 KCND2Q9NZV8 630 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 LHX6Q9UPM6 363 aa14.07□□□□□ -0.16
DDB1-207ENST00000535967 ASAP2O43150 1006 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 GJB5O95377 273 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 CHRNA1P02708 482 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 VTNP04004 478 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 PLCG1P19174 1290 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 GPC3P51654 580 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 CRYBB1P53674 252 aaPredicted RBP14.06□□□□□ -0.16
DDB1-207ENST00000535967 MXD4Q14582 209 aaPredicted RBP14.06□□□□□ -0.16
DDB1-207ENST00000535967 SPECC1Q5M775 1068 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 FBXO47Q5MNV8 452 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 ODR4Q5SWX8 454 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 AXDND1Q5T1B0 1012 aaPredicted RBP14.06□□□□□ -0.16
DDB1-207ENST00000535967 CNKSR3Q6P9H4 555 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 TSHZ1Q6ZSZ6 1077 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 KCNK18Q7Z418 384 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 SYT2Q8N9I0 419 aaPredicted RBP14.06□□□□□ -0.16
DDB1-207ENST00000535967 APBB2Q92870 758 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 ZBED2Q9BTP6 218 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 SUCLA2Q9P2R7 463 aaPredicted RBP14.06□□□□□ -0.16
DDB1-207ENST00000535967 PCDHA7Q9UN72 937 aa14.06□□□□□ -0.16
DDB1-207ENST00000535967 TRIOO75962 3097 aa14.05□□□□□ -0.16
DDB1-207ENST00000535967 C5orf42Q9H799 3197 aa14.05□□□□□ -0.16
DDB1-207ENST00000535967 CYP11B2P19099 503 aa14.05□□□□□ -0.16
DDB1-207ENST00000535967 TMEM62Q0P6H9 643 aa14.05□□□□□ -0.16
DDB1-207ENST00000535967 CCDC73Q6ZRK6 1079 aa14.05□□□□□ -0.16
DDB1-207ENST00000535967 USP49Q70CQ1 688 aa14.05□□□□□ -0.16
DDB1-207ENST00000535967 LARP4BQ92615 738 aaKnown RBP14.05□□□□□ -0.16
DDB1-207ENST00000535967 RAD54LQ92698 747 aa14.05□□□□□ -0.16
DDB1-207ENST00000535967 DDX12PQ92771 950 aa14.05□□□□□ -0.16
DDB1-207ENST00000535967 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
DDB1-207ENST00000535967 UBE2ZQ9H832 354 aaPredicted RBP14.05□□□□□ -0.16
DDB1-207ENST00000535967 COL4A3BPQ9Y5P4 624 aa14.05□□□□□ -0.16
DDB1-207ENST00000535967 ATG2AQ2TAZ0 1938 aa14.05□□□□□ -0.16
DDB1-207ENST00000535967 A0A087WWV3 80 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 GPR37L1O60883 481 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 EFCAB14O75071 495 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 GPR32O75388 356 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 PLA2G4BP0C869 781 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 GHRP10912 638 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 GUCY2CP25092 1073 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 EMP3P54852 163 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 SLC12A3P55017 1021 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 NLRP11P59045 1033 aaKnown RBP14.04□□□□□ -0.16
DDB1-207ENST00000535967 ERVK-21P61565 698 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 DRP2Q13474 957 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 TFDP1Q14186 410 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 LPIN1Q14693 890 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 KIZQ2M2Z5 673 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 PLEKHG4Q58EX7 1191 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 RESP18Q5W5W9 173 aa14.04□□□□□ -0.16
DDB1-207ENST00000535967 ADALQ6DHV7 355 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms