RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 FIZ1Q96SL8 496 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 HTATIP2Q9BUP3 242 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 NAT10Q9H0A0 1025 aaKnown RBP17.88■□□□□ 0.45
VAMP1-205ENST00000535927 ADAMTS10Q9H324 1103 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 TRMT13Q9NUP7 481 aaKnown RBP17.88■□□□□ 0.45
VAMP1-205ENST00000535927 TRPV2Q9Y5S1 764 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 LRRIQ4A6NIV6 560 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 PPP1R37O75864 691 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 CASP1P29466 404 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 AXLP30530 894 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 TLE2Q04725 743 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 STRN3Q13033 797 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 DRP2Q13474 957 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 STX1AQ16623 288 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 MAPK6Q16659 721 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 TRIM71Q2Q1W2 868 aaKnown RBP17.87■□□□□ 0.45
VAMP1-205ENST00000535927 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 RUFY4Q6ZNE9 571 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 EPM2AIP1Q7L775 607 aaPredicted RBP17.87■□□□□ 0.45
VAMP1-205ENST00000535927 DIS3LQ8TF46 1054 aaKnown RBP17.87■□□□□ 0.45
VAMP1-205ENST00000535927 TMEM174Q8WUU8 243 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 NLRP7Q8WX94 980 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 ACCSQ96QU6 501 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 FAM49AQ9H0Q0 323 aaPredicted RBP17.87■□□□□ 0.45
VAMP1-205ENST00000535927 TRPV6Q9H1D0 765 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 IFT122Q9HBG6 1241 aa17.87■□□□□ 0.45
VAMP1-205ENST00000535927 PRMT7Q9NVM4 692 aaPredicted RBP17.87■□□□□ 0.45
VAMP1-205ENST00000535927 COLQQ9Y215 455 aaPredicted RBP17.87■□□□□ 0.45
VAMP1-205ENST00000535927 PSMA7O14818 248 aa17.86■□□□□ 0.45
VAMP1-205ENST00000535927 GCNT3O95395 438 aa17.86■□□□□ 0.45
VAMP1-205ENST00000535927 SRGAP2CP0DJJ0 459 aa17.86■□□□□ 0.45
VAMP1-205ENST00000535927 SFPQP23246 707 aaKnown RBP eCLIP17.86■□□□□ 0.45
VAMP1-205ENST00000535927 ERCC5P28715 1186 aaPredicted RBP17.86■□□□□ 0.45
VAMP1-205ENST00000535927 THPOP40225 353 aa17.86■□□□□ 0.45
VAMP1-205ENST00000535927 CACNB1Q02641 598 aaPredicted RBP17.86■□□□□ 0.45
VAMP1-205ENST00000535927 STK4Q13043 487 aa17.86■□□□□ 0.45
VAMP1-205ENST00000535927 L1TD1Q5T7N2 865 aaKnown RBP17.86■□□□□ 0.45
VAMP1-205ENST00000535927 APBB1IPQ7Z5R6 666 aaPredicted RBP17.86■□□□□ 0.45
VAMP1-205ENST00000535927 BSNDQ8WZ55 320 aa17.86■□□□□ 0.45
VAMP1-205ENST00000535927 SCLT1Q96NL6 688 aa17.86■□□□□ 0.45
VAMP1-205ENST00000535927 FZD8Q9H461 694 aa17.86■□□□□ 0.45
VAMP1-205ENST00000535927 BICDL2A1A5D9 508 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 DENND3A2RUS2 1198 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 K7ENM7 598 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 ACKR2O00590 384 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 KIAA0391O15091 583 aaKnown RBP17.85■□□□□ 0.45
VAMP1-205ENST00000535927 SLC16A4O15374 487 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 PQBP1O60828 265 aaKnown RBP17.85■□□□□ 0.45
VAMP1-205ENST00000535927 VTNP04004 478 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 CLTBP09497 229 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 CKBP12277 381 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 DARSP14868 501 aaKnown RBP17.85■□□□□ 0.45
VAMP1-205ENST00000535927 SELPP16109 830 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 RFC2P35250 354 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 ATN1P54259 1190 aaPredicted RBP17.85■□□□□ 0.45
VAMP1-205ENST00000535927 ZNF445P59923 1031 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 FAAP100Q0VG06 881 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 MYBPC2Q14324 1141 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 TRIM60Q495X7 471 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 ZPBP2Q6X784 338 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 ADSSL1Q8N142 457 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 NLRP4Q96MN2 994 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 SLC39A2Q9NP94 309 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 TBX20Q9UMR3 447 aa17.85■□□□□ 0.45
VAMP1-205ENST00000535927 A0A087WZ62 844 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 PDXKO00764 312 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 KIAA0355O15063 1070 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 GPR182O15218 404 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 PIGRP01833 764 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 MGAT3Q09327 533 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 KNOP1Q1ED39 458 aaKnown RBP17.84■□□□□ 0.45
VAMP1-205ENST00000535927 SLFN12LQ6IEE8 588 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 MAP4K3Q8IVH8 894 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 KIAA0895Q8NCT3 520 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 CCDC51Q96ER9 411 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 FDXACB1Q9BRP7 624 aaPredicted RBP17.84■□□□□ 0.45
VAMP1-205ENST00000535927 CHST12Q9NRB3 414 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 TBX21Q9UL17 535 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 CDY2AQ9Y6F7 541 aa17.84■□□□□ 0.45
VAMP1-205ENST00000535927 BRCA2P51587 3418 aa17.83■□□□□ 0.45
VAMP1-205ENST00000535927 NMT1P30419 496 aaKnown RBP17.83■□□□□ 0.44
VAMP1-205ENST00000535927 LRRC63Q05C16 580 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 TYRO3Q06418 890 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 NFIL3Q16649 462 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 LRRC26Q2I0M4 334 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 KIZQ2M2Z5 673 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 CENPPQ6IPU0 288 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 HS2ST1Q7LGA3 356 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 KSR1Q8IVT5 923 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 SCFD1Q8WVM8 642 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 DHX38Q92620 1227 aaKnown RBP17.83■□□□□ 0.44
VAMP1-205ENST00000535927 ERCC4Q92889 916 aaPredicted RBP17.83■□□□□ 0.44
VAMP1-205ENST00000535927 BPIFA3Q9BQP9 254 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 FUCA2Q9BTY2 467 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 NOC4LQ9BVI4 516 aaKnown RBP17.83■□□□□ 0.44
VAMP1-205ENST00000535927 MRPL4Q9BYD3 311 aaKnown RBP17.83■□□□□ 0.44
VAMP1-205ENST00000535927 CCDC113Q9H0I3 377 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 GBP3Q9H0R5 595 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 TMEM39AQ9NV64 488 aa17.83■□□□□ 0.44
VAMP1-205ENST00000535927 ATP11BQ9Y2G3 1177 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms