RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 CDH22Q9UJ99 828 aa23.07■■□□□ 1.28
LTBR-205ENST00000535739 TPCN1Q9ULQ1 816 aa23.07■■□□□ 1.28
LTBR-205ENST00000535739 ARID2Q68CP9 1835 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 CCNT1O60563 726 aaKnown RBP23.06■■□□□ 1.28
LTBR-205ENST00000535739 CXCL14O95715 111 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 P4HBP07237 508 aaKnown RBP23.06■■□□□ 1.28
LTBR-205ENST00000535739 GCFC2P16383 781 aaKnown RBP23.06■■□□□ 1.28
LTBR-205ENST00000535739 HOXB8P17481 243 aaPredicted RBP23.06■■□□□ 1.28
LTBR-205ENST00000535739 SP100P23497 879 aaPredicted RBP23.06■■□□□ 1.28
LTBR-205ENST00000535739 NHLH1Q02575 133 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 BMP8AQ7Z5Y6 402 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 HAS1Q92839 578 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 CASP10Q92851 521 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 PBXIP1Q96AQ6 731 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 CEP170P1Q96L14 293 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 NRDE2Q9H7Z3 1164 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 TBC1D13Q9NVG8 400 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 INPP5FQ9Y2H2 1132 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 COL4A3BPQ9Y5P4 624 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 HCFC2Q9Y5Z7 792 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 STK36Q9NRP7 1315 aa23.06■■□□□ 1.28
LTBR-205ENST00000535739 PFKFB2O60825 505 aa23.05■■□□□ 1.28
LTBR-205ENST00000535739 CLASP2O75122 1294 aaKnown RBP23.05■■□□□ 1.28
LTBR-205ENST00000535739 SKIP12755 728 aa23.05■■□□□ 1.28
LTBR-205ENST00000535739 XBP1P17861 261 aa23.05■■□□□ 1.28
LTBR-205ENST00000535739 NOMO2Q5JPE7 1267 aa23.05■■□□□ 1.28
LTBR-205ENST00000535739 EARS2Q5JPH6 523 aaKnown RBP23.05■■□□□ 1.28
LTBR-205ENST00000535739 GLB1LQ6UWU2 654 aa23.05■■□□□ 1.28
LTBR-205ENST00000535739 VPS52Q8N1B4 723 aa23.05■■□□□ 1.28
LTBR-205ENST00000535739 AUTS2Q8WXX7 1259 aa23.05■■□□□ 1.28
LTBR-205ENST00000535739 SLC7A3Q8WY07 619 aa23.05■■□□□ 1.28
LTBR-205ENST00000535739 TMEM143Q96AN5 459 aa23.05■■□□□ 1.28
LTBR-205ENST00000535739 BMP2KQ9NSY1 1161 aaPredicted RBP23.05■■□□□ 1.28
LTBR-205ENST00000535739 DKC1O60832 514 aaKnown RBP eCLIP23.04■■□□□ 1.28
LTBR-205ENST00000535739 ZNF623O75123 536 aa23.04■■□□□ 1.28
LTBR-205ENST00000535739 OFD1O75665 1012 aa23.04■■□□□ 1.28
LTBR-205ENST00000535739 CTDNEP1O95476 244 aa23.04■■□□□ 1.28
LTBR-205ENST00000535739 SRGAP2CP0DJJ0 459 aa23.04■■□□□ 1.28
LTBR-205ENST00000535739 RAB27AP51159 221 aa23.04■■□□□ 1.28
LTBR-205ENST00000535739 POLGP54098 1239 aaPredicted RBP23.04■■□□□ 1.28
LTBR-205ENST00000535739 POTEDQ86YR6 584 aa23.04■■□□□ 1.28
LTBR-205ENST00000535739 PRPF31Q8WWY3 499 aaKnown RBP23.04■■□□□ 1.28
LTBR-205ENST00000535739 LXNQ9BS40 222 aa23.04■■□□□ 1.28
LTBR-205ENST00000535739 ZBP1Q9H171 429 aa23.04■■□□□ 1.28
LTBR-205ENST00000535739 DHX33Q9H6R0 707 aaKnown RBP23.04■■□□□ 1.28
LTBR-205ENST00000535739 AGPAT5Q9NUQ2 364 aa23.04■■□□□ 1.28
LTBR-205ENST00000535739 RGL1Q9NZL6 768 aa23.04■■□□□ 1.28
LTBR-205ENST00000535739 FAM205CA6NFA0 338 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 TBX3O15119 743 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 MARCH6O60337 910 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 GALTP07902 379 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 RNASELQ05823 741 aaKnown RBP23.03■■□□□ 1.28
LTBR-205ENST00000535739 BMS1Q14692 1282 aaKnown RBP23.03■■□□□ 1.28
LTBR-205ENST00000535739 EPHA7Q15375 998 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 TPRNQ4KMQ1 711 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 NCAPH2Q6IBW4 605 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 BCL7CQ8WUZ0 217 aaPredicted RBP23.03■■□□□ 1.28
LTBR-205ENST00000535739 RSPH1Q8WYR4 309 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 IGSF21Q96ID5 467 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 GBP3Q9H0R5 595 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 MINDY3Q9H8M7 445 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 ORC3Q9UBD5 711 aaPredicted RBP23.03■■□□□ 1.28
LTBR-205ENST00000535739 DNAJB4Q9UDY4 337 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 PCDHB2Q9Y5E7 798 aa23.03■■□□□ 1.28
LTBR-205ENST00000535739 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.02■■□□□ 1.28
LTBR-205ENST00000535739 ZBTB39O15060 712 aa23.02■■□□□ 1.28
LTBR-205ENST00000535739 YWHABP31946 246 aaKnown RBP23.02■■□□□ 1.28
LTBR-205ENST00000535739 RFC5P40937 340 aa23.02■■□□□ 1.28
LTBR-205ENST00000535739 SIGLEC14Q08ET2 396 aa23.02■■□□□ 1.28
LTBR-205ENST00000535739 DDX53Q86TM3 631 aaKnown RBP23.02■■□□□ 1.28
LTBR-205ENST00000535739 C4orf19Q8IY42 314 aa23.02■■□□□ 1.28
LTBR-205ENST00000535739 PSPC1Q8WXF1 523 aaKnown RBP23.02■■□□□ 1.28
LTBR-205ENST00000535739 DYDC2Q96IM9 177 aa23.02■■□□□ 1.28
LTBR-205ENST00000535739 TSHZ2Q9NRE2 1034 aa23.02■■□□□ 1.28
LTBR-205ENST00000535739 KMT2EQ8IZD2 1858 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 B4GALT3O60512 393 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 SLC11A1P49279 550 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 CYP4A11Q02928 519 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 SPIRE1Q08AE8 756 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 LAMTOR4Q0VGL1 99 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 NR5A1Q13285 461 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 CTTNQ14247 550 aaKnown RBP23.01■■□□□ 1.27
LTBR-205ENST00000535739 PTPN21Q16825 1174 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 IER5LQ5T953 404 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 CES5AQ6NT32 575 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 AGMOQ6ZNB7 445 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 SRGAP1Q7Z6B7 1085 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 ZNF280BQ86YH2 543 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 EXOC8Q8IYI6 725 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 PGBD4Q96DM1 585 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 NAP1L4Q99733 375 aaKnown RBP23.01■■□□□ 1.27
LTBR-205ENST00000535739 ADAM7Q9H2U9 754 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 POMKQ9H5K3 350 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 PPME1Q9Y570 386 aa23.01■■□□□ 1.27
LTBR-205ENST00000535739 WEE2P0C1S8 567 aa23■■□□□ 1.27
LTBR-205ENST00000535739 CTSAP10619 480 aa23■■□□□ 1.27
LTBR-205ENST00000535739 HOXA11P31270 313 aaPredicted RBP23■■□□□ 1.27
LTBR-205ENST00000535739 MRE11P49959 708 aa23■■□□□ 1.27
LTBR-205ENST00000535739 AFF1P51825 1210 aaKnown RBP23■■□□□ 1.27
LTBR-205ENST00000535739 AK2P54819 239 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms