RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ZBTB46Q86UZ6 589 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 PNMA8AQ86V59 439 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-202ENST00000535689 REXO1L1PQ8IX06 675 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 CNTD1Q8N815 330 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 LINC00482Q8N8I6 264 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 DTX3Q8N9I9 347 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 ZSCAN18Q8TBC5 510 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-202ENST00000535689 GFM2Q969S9 779 aaKnown RBP4.29□□□□□ -1.72
SNHG1-202ENST00000535689 CHMP4CQ96CF2 233 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 MTMR8Q96EF0 704 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 TOX2Q96NM4 488 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 CAMKK2Q96RR4 588 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 OR10A5Q9H207 317 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 SAP30BPQ9UHR5 308 aaKnown RBP4.29□□□□□ -1.72
SNHG1-202ENST00000535689 VWA7Q9Y334 891 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 NUMBLQ9Y6R0 609 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 LMTK2Q8IWU2 1503 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 NOS1P29475 1434 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 MST1RQ04912 1400 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 PARD3Q8TEW0 1356 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 MYOCOSA0A1B0GUC4 107 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 C9orf118A6NHY6 69 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 ACOT7O00154 380 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 KCNK3O14649 394 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 PRPF6O94906 941 aaKnown RBP4.28□□□□□ -1.72
SNHG1-202ENST00000535689 FSBPO95073 299 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 MMEP08473 750 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 STAT5AP42229 794 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 SLC16A1P53985 500 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 MRPS9P82933 396 aaKnown RBP4.28□□□□□ -1.72
SNHG1-202ENST00000535689 SLC6A3Q01959 620 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 R3HDM1Q15032 1099 aaKnown RBP4.28□□□□□ -1.72
SNHG1-202ENST00000535689 SURF1Q15526 300 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 FSCN1Q16658 493 aaKnown RBP4.28□□□□□ -1.72
SNHG1-202ENST00000535689 CATSPEREQ5SY80 951 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 TCERG1LQ5VWI1 586 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 CIAPIN1Q6FI81 312 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 GRAMD4Q6IC98 578 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 BMP8AQ7Z5Y6 402 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 PLEKHH3Q7Z736 793 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 POU5F2Q8N7G0 328 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 CDYL2Q8N8U2 506 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 ZBTB8AQ96BR9 441 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 SLC13A1Q9BZW2 595 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 MKS1Q9NXB0 559 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 SAE1Q9UBE0 346 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-202ENST00000535689 CROTQ9UKG9 612 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 RGPD1P0DJD0 1748 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 BCL9LQ86UU0 1499 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 RALGAPBQ86X10 1494 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 ZFYVE9O95405 1425 aa4.28□□□□□ -1.72
SNHG1-202ENST00000535689 NINLQ9Y2I6 1382 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 GCC2Q8IWJ2 1684 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 A0A0G2JNJ9 132 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 KLHL33A6NCF5 533 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 GOLGA6CA6NDK9 693 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 GOLGA6BA6NDN3 693 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 TRIM75PA6NK02 468 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-202ENST00000535689 ETV2O00321 342 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-202ENST00000535689 APOL3O95236 402 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 EFEMP2O95967 443 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 PRLP01236 227 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 CYP1A1P04798 512 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-202ENST00000535689 C8BP07358 591 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 GOLGA6DP0CG33 693 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 YBX3P16989 372 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNHG1-202ENST00000535689 ENPP1P22413 925 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 FBLN1P23142 703 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 IGFBP6P24592 240 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-202ENST00000535689 RPL13P26373 211 aaKnown RBP4.27□□□□□ -1.73
SNHG1-202ENST00000535689 RECQLP46063 649 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-202ENST00000535689 MEOX1P50221 254 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 ITGA1P56199 1179 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 BRDTQ58F21 947 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-202ENST00000535689 HSP90AB2PQ58FF8 381 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 ZMAT1Q5H9K5 638 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 FAM26FQ5R3K3 315 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 ODR4Q5SWX8 454 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 PGM2L1Q6PCE3 622 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 TRMT10BQ6PF06 316 aaKnown RBP4.27□□□□□ -1.73
SNHG1-202ENST00000535689 BORAQ6PGQ7 559 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 TMC5Q6UXY8 1006 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 ATG14Q6ZNE5 492 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 OTOP2Q7RTS6 562 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 CILP2Q8IUL8 1156 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 GLB1L2Q8IW92 636 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 OR14C36Q8NHC7 312 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 AUTS2Q8WXX7 1259 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 TMEM168Q9H0V1 697 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 IRF2BPLQ9H1B7 796 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 UCKL1Q9NWZ5 548 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 GEMIN8Q9NWZ8 242 aaKnown RBP4.27□□□□□ -1.73
SNHG1-202ENST00000535689 GOLGA6AQ9NYA3 693 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 Q9UFV3 132 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 TELO2Q9Y4R8 837 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 KCTD3Q9Y597 815 aa4.27□□□□□ -1.73
SNHG1-202ENST00000535689 TMEM131LA2VDJ0 1609 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms