RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 SPATA31A1Q5TZJ5 1347 aa14.48□□□□□ -0.09
HDAC4-214ENST00000535493 GOLGA6L10A0A0M3HER8 536 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 FERP16591 822 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 TCP10Q12799 353 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 IKQ13123 557 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-214ENST00000535493 GRAPQ13588 217 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 SNX1Q13596 522 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 FAM98CQ17RN3 349 aaKnown RBP14.47□□□□□ -0.09
HDAC4-214ENST00000535493 PHLDB3Q6NSJ2 640 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 CCDC137Q6PK04 289 aaKnown RBP14.47□□□□□ -0.09
HDAC4-214ENST00000535493 PIGWQ7Z7B1 504 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 GRAPLQ8TC17 118 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-214ENST00000535493 HOOK2Q96ED9 719 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 TBK1Q9UHD2 729 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 CCDC169A6NNP5 214 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 TCP11X1B4DZS4 312 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 DNAJC8O75937 253 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-214ENST00000535493 ANP32DO95626 131 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 MYCNP04198 464 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-214ENST00000535493 VCAM1P19320 739 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 FMO5P49326 533 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 CCDC105Q8IYK2 499 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 C3orf20Q8ND61 904 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 ETNPPLQ8TBG4 499 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 KAT5Q92993 513 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 SH2D3AQ9BRG2 576 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 PCIF1Q9H4Z3 704 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 KCNK9Q9NPC2 374 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 SERPINB13Q9UIV8 391 aa14.47□□□□□ -0.09
HDAC4-214ENST00000535493 FTLP02792 175 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-214ENST00000535493 PYGMP11217 842 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 VPS41P49754 854 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 EIF3BP55884 814 aaKnown RBP14.46□□□□□ -0.09
HDAC4-214ENST00000535493 DLG4P78352 724 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 NFIAQ12857 509 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 NSMFQ6X4W1 530 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 PHLDB2Q86SQ0 1253 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 CRAMP1Q96RY5 1269 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 POLLQ9UGP5 575 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 PCDHAC2Q9Y5I4 1007 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 A0A0A6YYK5 440 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-214ENST00000535493 hCG_1984214I3L0E3 225 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 RASGRF2O14827 1237 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 CALCAP01258 141 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 TMEM253P0C7T8 217 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 GCFC2P16383 781 aaKnown RBP14.46□□□□□ -0.09
HDAC4-214ENST00000535493 RPL13P26373 211 aaKnown RBP14.46□□□□□ -0.09
HDAC4-214ENST00000535493 SHMT1P34896 483 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 PTGIRP43119 386 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 NOVP48745 357 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 AUHQ13825 339 aaKnown RBP14.46□□□□□ -0.09
HDAC4-214ENST00000535493 ARMC9Q7Z3E5 817 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 EXOC3L1Q86VI1 746 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 TEX2Q8IWB9 1127 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 ZNF713Q8N859 430 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-214ENST00000535493 ZSWIM2Q8NEG5 633 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 FAM118BQ9BPY3 351 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 SLC12A4Q9UP95 1085 aa14.46□□□□□ -0.09
HDAC4-214ENST00000535493 PITPNM2Q9BZ72 1349 aa14.46□□□□□ -0.1
HDAC4-214ENST00000535493 NAV1Q8NEY1 1877 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 MSH4O15457 936 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 NUDT17P0C025 328 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 COMTP21964 271 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 RPA1P27694 616 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 ALDH5A1P51649 535 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-214ENST00000535493 GABPAQ06546 454 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 NUGGCQ68CJ6 796 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 TLDC1Q6P9B6 456 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 LENG9Q96B70 501 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 STK33Q9BYT3 514 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 CARD9Q9H257 536 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 RABGAP1Q9Y3P9 1069 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 MYO3BQ8WXR4 1341 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 IGF2BP3O00425 579 aaKnown RBP eCLIP14.45□□□□□ -0.1
HDAC4-214ENST00000535493 RIPK2O43353 540 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 LMNB1P20700 586 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 CNGA2Q16280 664 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 RINT1Q6NUQ1 792 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 RPAINQ86UA6 219 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 C1orf54Q8WWF1 131 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 PGM2Q96G03 612 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 BORCS6Q96GS4 357 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 EIF2AK1Q9BQI3 630 aaKnown RBP14.45□□□□□ -0.1
HDAC4-214ENST00000535493 INTS2Q9H0H0 1204 aaKnown RBP14.45□□□□□ -0.1
HDAC4-214ENST00000535493 ECT2Q9H8V3 914 aa14.45□□□□□ -0.1
HDAC4-214ENST00000535493 UBE2TQ9NPD8 197 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-214ENST00000535493 DIAPH2O60879 1101 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 SLC8A1P32418 973 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 PSMC2P35998 433 aaKnown RBP14.44□□□□□ -0.1
HDAC4-214ENST00000535493 PPP2R5AQ15172 486 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 KCNV2Q8TDN2 545 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 ADAM33Q9BZ11 813 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 METTL14Q9HCE5 456 aaKnown RBP14.44□□□□□ -0.1
HDAC4-214ENST00000535493 ZMYM2Q9UBW7 1377 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 FAM13AO94988 1023 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 KRT16P08779 473 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 RARAP10276 462 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 DLATP10515 647 aaKnown RBP14.44□□□□□ -0.1
HDAC4-214ENST00000535493 ZNF76P36508 570 aa14.44□□□□□ -0.1
HDAC4-214ENST00000535493 MPP2Q14168 576 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms