RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SCRN1Q12765 414 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 MXD4Q14582 209 aaPredicted RBP14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 TARBP2Q15633 366 aaKnown RBP14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 XKR9Q5GH70 373 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 NOMO2Q5JPE7 1267 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 TMEM184AQ6ZMB5 413 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 LOXHD1Q8IVV2 1947 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 VPS52Q8N1B4 723 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 SLC39A11Q8N1S5 342 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 EVPLQ92817 2033 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 SH2D3AQ9BRG2 576 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 LXNQ9BS40 222 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 IRF2BPLQ9H1B7 796 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 CNTNAP2Q9UHC6 1331 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 PCDHGC5Q9Y5F6 944 aa14.79□□□□□ -0.04
CLSTN3-205ENST00000535452 ADAMTS3O15072 1205 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 PFKFB2O60825 505 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 CSDE1O75534 798 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 GLP2RO95838 553 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 ALDH2P05091 517 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 GNL2Q13823 731 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 TMEM132AQ24JP5 1023 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 CLLU1OSQ5K130 101 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 ATAT1Q5SQI0 421 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 PLA2G4FQ68DD2 849 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 TRIM67Q6ZTA4 783 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 TPH2Q8IWU9 490 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 C4orf19Q8IY42 314 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 MRPL43Q8N983 215 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 MBOAT7Q96N66 472 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 TRAIPQ9BWF2 469 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 APOL5Q9BWW9 433 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 DBR1Q9UK59 544 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 PCDHA12Q9UN75 941 aa14.78□□□□□ -0.04
CLSTN3-205ENST00000535452 IGKV6-21A0A0C4DH24 114 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 TMEM221A6NGB7 291 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 LOC730098B7Z3J9 87 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 M0R296 226 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 SLC37A4O43826 429 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 AXLP30530 894 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 PBX3P40426 434 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 SIGLEC14Q08ET2 396 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 EMC2Q15006 297 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 CALCRLQ16602 461 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 LONRF3Q496Y0 759 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 NOTUMQ6P988 496 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 LRRC55Q6ZSA7 311 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 ANO5Q75V66 913 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 CABP7Q86V35 215 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 RNF149Q8NC42 400 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 AIFM3Q96NN9 605 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 RSAD1Q9HA92 442 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 AGPAT5Q9NUQ2 364 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 HCSTQ9UBK5 93 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 PCDHB2Q9Y5E7 798 aa14.77□□□□□ -0.05
CLSTN3-205ENST00000535452 FNDC1Q4ZHG4 1894 aaPredicted RBP14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 KIAA1671Q9BY89 1806 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 TMEM150BA6NC51 233 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 HIDE1A8MVS5 230 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 NT5C1B-RDH14C9J2C7 533 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 M0R2N6 131 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 ZNF623O75123 536 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 ITGA4P13612 1032 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 ZXDAP98168 799 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 CYP4A11Q02928 519 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 DRP2Q13474 957 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 MTMR3Q13615 1198 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 KIAA1841Q6NSI8 718 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 HFE2Q6ZVN8 426 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 DDX53Q86TM3 631 aaKnown RBP14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 ZNF598Q86UK7 904 aaKnown RBP14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 PLCD3Q8N3E9 789 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 TDRD5Q8NAT2 981 aaKnown RBP14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 ERMNQ8TAM6 284 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 PRPF31Q8WWY3 499 aaKnown RBP14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 TMEM143Q96AN5 459 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 ACSF2Q96CM8 615 aaPredicted RBP14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 CCDC51Q96ER9 411 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 IGSF21Q96ID5 467 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 KCNMB3Q9NPA1 279 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 MRPL17Q9NRX2 175 aaKnown RBP14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 BMP2KQ9NSY1 1161 aaPredicted RBP14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 TBC1D13Q9NVG8 400 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 FAN1Q9Y2M0 1017 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 HCFC2Q9Y5Z7 792 aa14.76□□□□□ -0.05
CLSTN3-205ENST00000535452 MUC3AQ02505 3323 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 C2orf71A6NGG8 1288 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 INO80B-WBP1J3KQ70 363 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 NEMFO60524 1076 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 DGAT1O75907 488 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 URODP06132 367 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 CTSAP10619 480 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 KLRC2P26717 231 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 PTPN5P54829 565 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 NPEPPSP55786 919 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 LAMTOR4Q0VGL1 99 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 B3GNT9Q6UX72 402 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 BMP8AQ7Z5Y6 402 aa14.75□□□□□ -0.05
CLSTN3-205ENST00000535452 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms