RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 NLRP11P59045 1033 aaKnown RBP9.45□□□□□ -0.9
CLIP1-206ENST00000535290 PRKCQQ04759 706 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 MTAPQ13126 283 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 FZD5Q13467 585 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 CSRP2Q16527 193 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 LONRF3Q496Y0 759 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 ZBTB41Q5SVQ8 909 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 CYP26C1Q6V0L0 522 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 PRR23BQ6ZRT6 265 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 SPATA31D4Q6ZUB0 917 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 METTL13Q8N6R0 699 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 KDF1Q8NAX2 398 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-206ENST00000535290 DDX1Q92499 740 aaKnown RBP9.45□□□□□ -0.9
CLIP1-206ENST00000535290 LPPQ93052 612 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 MYL10Q9BUA6 226 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 ADAMTS10Q9H324 1103 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 KCNH7Q9NS40 1196 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 RAB23Q9ULC3 237 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 SDK1Q7Z5N4 2213 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 F5P12259 2224 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 SPEGQ15772 3267 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 IGKV6D-21A0A0A0MT36 114 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 MEIS3P2A8K0S8 358 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 TEX28O15482 410 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 MAFGO15525 162 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 ATG7O95352 703 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 ZIC2O95409 532 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-206ENST00000535290 CCNE2O96020 404 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 NCLP19338 710 aaKnown RBP9.44□□□□□ -0.9
CLIP1-206ENST00000535290 ATP4AP20648 1035 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 EIF4BP23588 611 aaKnown RBP9.44□□□□□ -0.9
CLIP1-206ENST00000535290 MAGEA9P43362 315 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 SLC26A2P50443 739 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 CLCN3P51790 818 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 AK2P54819 239 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 ITGB3BPQ13352 177 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-206ENST00000535290 ZNF484Q5JVG2 852 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 C20orf194Q5TEA3 1177 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 IL31Q6EBC2 164 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 LRSAM1Q6UWE0 723 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 UNQ6494/PRO21346Q6UXR6 183 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 ZNF280BQ86YH2 543 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 CELF5Q8N6W0 485 aaKnown RBP9.44□□□□□ -0.9
CLIP1-206ENST00000535290 MAP4K1Q92918 833 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 FAM126AQ9BYI3 521 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-206ENST00000535290 NT5C3AQ9H0P0 336 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 GBP3Q9H0R5 595 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 PIDD1Q9HB75 910 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 SENP2Q9HC62 589 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 MRPL17Q9NRX2 175 aaKnown RBP9.44□□□□□ -0.9
CLIP1-206ENST00000535290 FAM217BQ9NTX9 383 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-206ENST00000535290 INPP5FQ9Y2H2 1132 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 SALL3Q9BXA9 1300 aa9.44□□□□□ -0.9
CLIP1-206ENST00000535290 COL1A2P08123 1366 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 NFASCO94856 1347 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 SHISA7A6NL88 538 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 BACH1O14867 736 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 CSDE1O75534 798 aaKnown RBP9.43□□□□□ -0.9
CLIP1-206ENST00000535290 PAPLNO95428 1278 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 GLUD1P00367 558 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 RPS9P46781 194 aaKnown RBP9.43□□□□□ -0.9
CLIP1-206ENST00000535290 RING1Q06587 406 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 UBE2SQ16763 222 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 NOMO2Q5JPE7 1267 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 ABHD15Q6UXT9 468 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 CYB5R4Q7L1T6 521 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 TAS1R1Q7RTX1 841 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 TRMT1LQ7Z2T5 733 aaKnown RBP9.43□□□□□ -0.9
CLIP1-206ENST00000535290 CCDC60Q8IWA6 550 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-206ENST00000535290 RPS6KC1Q96S38 1066 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 SDF4Q9BRK5 362 aa9.43□□□□□ -0.9
CLIP1-206ENST00000535290 LAMA4Q16363 1823 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 SRRM3A6NNA2 597 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-206ENST00000535290 DDX39AO00148 427 aaKnown RBP9.42□□□□□ -0.9
CLIP1-206ENST00000535290 HRO43593 1189 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 OFD1O75665 1012 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 DDHD2O94830 711 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 ADH1AP07327 375 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 DARSP14868 501 aaKnown RBP9.42□□□□□ -0.9
CLIP1-206ENST00000535290 FSHRP23945 695 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 PHKA2P46019 1235 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 AFF1P51825 1210 aaKnown RBP9.42□□□□□ -0.9
CLIP1-206ENST00000535290 RNASELQ05823 741 aaKnown RBP9.42□□□□□ -0.9
CLIP1-206ENST00000535290 TROAPQ12815 778 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 SIM2Q14190 667 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-206ENST00000535290 PDXDC2PQ6P474 469 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 GLB1LQ6UWU2 654 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 RSPO2Q6UXX9 243 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-206ENST00000535290 TPRG1Q6ZUI0 275 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 LINC01465Q8N7H1 131 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 PHKBQ93100 1093 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 NELL2Q99435 816 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 MXRA8Q9BRK3 442 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 PRKD2Q9BZL6 878 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 KRT23Q9C075 422 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 PSTPIP2Q9H939 334 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 AGO4Q9HCK5 861 aaKnown RBP9.42□□□□□ -0.9
CLIP1-206ENST00000535290 ZNF302Q9NR11 478 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 RXFP3Q9NSD7 469 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 DACT1Q9NYF0 836 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms