RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 CPNE8Q86YQ8 564 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 C3orf20Q8ND61 904 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 NEK9Q8TD19 979 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 CCT6BQ92526 530 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 CCDC17Q96LX7 622 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 FIZ1Q96SL8 496 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 HSD17B14Q9BPX1 270 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 ZC3H12CQ9C0D7 883 aaKnown RBP11.09□□□□□ -0.63
DDB1-204ENST00000535147 ADAM7Q9H2U9 754 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 APEX2Q9UBZ4 518 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 TCRBV7S2A1N4TA0A589 114 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 TISP43B9A030 160 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 NDUFB10O96000 172 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 FGFR4P22455 802 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 RPL21P46778 160 aaKnown RBP11.09□□□□□ -0.63
DDB1-204ENST00000535147 EIF3BP55884 814 aaKnown RBP11.09□□□□□ -0.63
DDB1-204ENST00000535147 DLG4P78352 724 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 MAPK7Q13164 816 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 DENND2CQ68D51 928 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 TTC27Q6P3X3 843 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 MAEAQ7L5Y9 396 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 CEP57Q86XR8 500 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 FAM178BQ8IXR5 827 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 TEKT1Q969V4 418 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 HVCN1Q96D96 273 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 POLR3CQ9BUI4 534 aaPredicted RBP11.09□□□□□ -0.63
DDB1-204ENST00000535147 WDR18Q9BV38 432 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 FAM129AQ9BZQ8 928 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 COA1Q9GZY4 146 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 PARVGQ9HBI0 331 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 AGPAT3Q9NRZ7 376 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 CTTNBP2NLQ9P2B4 639 aa11.09□□□□□ -0.63
DDB1-204ENST00000535147 WRAP73Q9P2S5 460 aaPredicted RBP11.09□□□□□ -0.63
DDB1-204ENST00000535147 ATP8B3O60423 1300 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 FRMPD4Q14CM0 1322 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 RPTORQ8N122 1335 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 IGLV3-22A0A075B6J6 115 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 ANKRD62A6NC57 917 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 ATMINO43313 823 aaPredicted RBP11.08□□□□□ -0.64
DDB1-204ENST00000535147 GAP43P17677 238 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 IFNAR2P48551 515 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 MYL7Q01449 175 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 CCDC38Q502W7 563 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 ODR4Q5SWX8 454 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 HS2ST1Q7LGA3 356 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 ZNF720Q7Z2F6 126 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 HOOK3Q86VS8 718 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 KIAA0825Q8IV33 1275 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 PARP9Q8IXQ6 854 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 PRELID2Q8N945 189 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 EPS8L3Q8TE67 593 aaKnown RBP11.08□□□□□ -0.64
DDB1-204ENST00000535147 MKL1Q969V6 931 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 SCLT1Q96NL6 688 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 ZNF317Q96PQ6 595 aaPredicted RBP11.08□□□□□ -0.64
DDB1-204ENST00000535147 ACP6Q9NPH0 428 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 GRHL1Q9NZI5 618 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 FRMD4BQ9Y2L6 1034 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 PPEF1O14829 653 aaPredicted RBP11.08□□□□□ -0.64
DDB1-204ENST00000535147 EXOC3O60645 756 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 FTLP02792 175 aaPredicted RBP11.08□□□□□ -0.64
DDB1-204ENST00000535147 CIITAP33076 1130 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 RDXP35241 583 aaKnown RBP11.08□□□□□ -0.64
DDB1-204ENST00000535147 PTGIRP43119 386 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 JAG1P78504 1218 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 SH3BP5LQ7L8J4 393 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 OTOP1Q7RTM1 612 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 SGSM3Q96HU1 749 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 CCDC113Q9H0I3 377 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 PCIF1Q9H4Z3 704 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 CNOT10Q9H9A5 744 aaKnown RBP11.08□□□□□ -0.64
DDB1-204ENST00000535147 NYAP2Q9P242 653 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 TPX2Q9ULW0 747 aaKnown RBP11.08□□□□□ -0.64
DDB1-204ENST00000535147 PTPN22Q9Y2R2 807 aa11.08□□□□□ -0.64
DDB1-204ENST00000535147 ANKRD63C9JTQ0 380 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 EIF3DO15371 548 aaKnown RBP eCLIP11.07□□□□□ -0.64
DDB1-204ENST00000535147 RGS16O15492 202 aaPredicted RBP11.07□□□□□ -0.64
DDB1-204ENST00000535147 CFBP00751 764 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 FOSP01100 380 aaPredicted RBP11.07□□□□□ -0.64
DDB1-204ENST00000535147 NUDT17P0C025 328 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 CRKP46108 304 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 RBM5P52756 815 aaKnown RBP eCLIP11.07□□□□□ -0.64
DDB1-204ENST00000535147 MESDQ14696 234 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 SNCBQ16143 134 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 SYDE2Q5VT97 1194 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 LRCH2Q5VUJ6 765 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 LRRC34Q8IZ02 419 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 ATXN2LQ8WWM7 1075 aaKnown RBP11.07□□□□□ -0.64
DDB1-204ENST00000535147 KAT5Q92993 513 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 NAP1L3Q99457 506 aaPredicted RBP11.07□□□□□ -0.64
DDB1-204ENST00000535147 PRMT1Q99873 361 aaKnown RBP11.07□□□□□ -0.64
DDB1-204ENST00000535147 AGPAT1Q99943 283 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 UBE2TQ9NPD8 197 aaPredicted RBP11.07□□□□□ -0.64
DDB1-204ENST00000535147 FAM187AA6NFU0 413 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 TRIM37O94972 964 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 HOXA10P31260 410 aaPredicted RBP11.07□□□□□ -0.64
DDB1-204ENST00000535147 MMP13P45452 471 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 KCNJ1P48048 391 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 DHX34Q14147 1143 aaKnown RBP11.07□□□□□ -0.64
DDB1-204ENST00000535147 E2F5Q15329 346 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms