RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 ALDH18A1P54886 795 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 GABREP78334 506 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 OLR1P78380 273 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 ATP2B2Q01814 1243 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PLCB3Q01970 1234 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 KLC1Q07866 573 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 SEMA3AQ14563 771 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 TCEAL1Q15170 157 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PKN2Q16513 984 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 CRY1Q16526 586 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 LONRF2Q1L5Z9 754 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 ARL13BQ3SXY8 428 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 ZC3H12BQ5HYM0 836 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 CEP78Q5JTW2 689 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 ZMYM1Q5SVZ6 1142 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 GKAP1Q5VSY0 366 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 USPL1Q5W0Q7 1092 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 CTRB2Q6GPI1 263 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 OTUD7BQ6GQQ9 843 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 KIAA1841Q6NSI8 718 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 ZSCAN25Q6NSZ9 544 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PRPF40BQ6NWY9 871 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 TTC23LQ6PF05 361 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PPP1R21Q6ZMI0 780 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 SLC51BQ86UW2 128 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 DDX42Q86XP3 938 aaKnown RBP eCLIP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 SPATA2LQ8IUW3 424 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 RHOT2Q8IXI1 618 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 CKAP2LQ8IYA6 745 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 VPS52Q8N1B4 723 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 TMEM130Q8N3G9 435 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 TMEM87AQ8NBN3 555 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 FLCNQ8NFG4 579 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 CCDC148Q8NFR7 591 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 MDM1Q8TC05 714 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 SNX29Q8TEQ0 813 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 NSMCE1Q8WV22 266 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 CASP10Q92851 521 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PEX13Q92968 403 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 NXPE3Q969Y0 559 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 KLHDC7BQ96G42 594 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 CCDC42Q96M95 316 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 JAKMIP1Q96N16 626 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 TUBGCP5Q96RT8 1024 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 UBL7Q96S82 380 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 APBA2Q99767 749 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 NAT10Q9H0A0 1025 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 MRPL18Q9H0U6 180 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 GBA3Q9H227 469 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 VCXQ9H320 206 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 C8orf33Q9H7E9 229 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 XAB2Q9HCS7 855 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PIH1D3Q9NQM4 214 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 SH3GLB2Q9NR46 395 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PDP2Q9P2J9 529 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 MBD2Q9UBB5 411 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 EGFL7Q9UHF1 273 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 SAP30BPQ9UHR5 308 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 RASAL2Q9UJF2 1139 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 AGO2Q9UKV8 859 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 RAB21Q9UL25 225 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 RIMKLBQ9ULI2 386 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 TCOF1Q13428 1488 aaKnown RBP5.63□□□□□ -1.51
SNHG1-201ENST00000535076 PLB1Q6P1J6 1458 aa5.63□□□□□ -1.51
SNHG1-201ENST00000535076 SYNJ2BP-COX16A0A087WUM0 186 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 KANSL1LA0AUZ9 987 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 OR5K4A6NMS3 321 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 ERVV-2B6SEH9 535 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 RASA4BC9J798 803 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 MYO1FO00160 1098 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 MATN2O00339 956 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 KLHL41O60662 606 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 TSC22D2O75157 780 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 ARIH2O95376 493 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 LCA5LO95447 670 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 IGHA2P01877 340 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 PCSK2P16519 638 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 ZKSCAN1P17029 563 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-201ENST00000535076 TBXAS1P24557 533 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-201ENST00000535076 NFKBIAP25963 317 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 RPL9P32969 192 aaKnown RBP5.62□□□□□ -1.51
SNHG1-201ENST00000535076 CD68P34810 354 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-201ENST00000535076 SERPINB6P35237 376 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 HAAOP46952 286 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 MXRA7P84157 204 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 GRSF1Q12849 480 aaKnown RBP eCLIP5.62□□□□□ -1.51
SNHG1-201ENST00000535076 PPFIA1Q13136 1202 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 FBXO43Q4G163 708 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 LACTB2Q53H82 288 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-201ENST00000535076 TMTC4Q5T4D3 741 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 RNASEH2BQ5TBB1 312 aaKnown RBP5.62□□□□□ -1.51
SNHG1-201ENST00000535076 MEX3CQ5U5Q3 659 aaKnown RBP5.62□□□□□ -1.51
SNHG1-201ENST00000535076 METTL11BQ5VVY1 283 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 SNX30Q5VWJ9 437 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 SIGIRRQ6IA17 410 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 PLBD1Q6P4A8 553 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 ZNF600Q6ZNG1 722 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 RSRC2Q7L4I2 434 aaKnown RBP5.62□□□□□ -1.51
SNHG1-201ENST00000535076 VN1R5Q7Z5H4 357 aa5.62□□□□□ -1.51
SNHG1-201ENST00000535076 RALYLQ86SE5 291 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms