RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 LRRC8AQ8IWT6 810 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CEP57L1Q8IYX8 460 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 DACT3Q96B18 629 aaPredicted RBP6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 AIFM3Q96NN9 605 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ALG1Q9BT22 464 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 KRTAP9-3Q9BYQ3 159 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 TRIM5Q9C035 493 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 MKRN2Q9H000 416 aaKnown RBP6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CNNM1Q9NRU3 951 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 GPR55Q9Y2T6 319 aaPredicted RBP6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 THRAP3Q9Y2W1 955 aaKnown RBP6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 PDS5AQ29RF7 1337 aaKnown RBP6.77□□□□□ -1.32
TNFRSF1A-206ENST00000535038 A0A087WWV3 80 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 WTIPA6NIX2 430 aaPredicted RBP6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 B4E1Z4 1266 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MEIS1O00470 390 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 EXOC5O00471 708 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 ZBTB43O43298 467 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 ZNF202O95125 648 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MBD4O95243 580 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 PFKFB1P16118 471 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 GNAT2P19087 354 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 METAP2P50579 478 aaKnown RBP eCLIP6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 TOB1P50616 345 aaPredicted RBP6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 STK38Q15208 465 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SF3B3Q15393 1217 aaKnown RBP6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SEC23AQ15436 765 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 DPCR1Q3MIW9 517 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SEZ6Q53EL9 994 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 AKNAD1Q5T1N1 836 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 GK5Q6ZS86 529 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 VPS37DQ86XT2 251 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 UTP14AQ9BVJ6 771 aaKnown RBP6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 KRTAP4-5Q9BYR2 181 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 ERVK13-1Q9NX77 482 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 UBP1Q9NZI7 540 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 IMPACTQ9P2X3 320 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CLIP2Q9UDT6 1046 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MYH2Q9UKX2 1941 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 TAF1P21675 1872 aa6.77□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SPATA31A5Q5VU36 1347 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SPATA31A7Q8IWB4 1347 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 IRS2Q9Y4H2 1338 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 ADAMTS20P59510 1910 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SMTNL1A8MU46 457 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MYO1BO43795 1136 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CUTAO60888 179 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 IDH1O75874 414 aaKnown RBP6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CRKLP46109 303 aaKnown RBP6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CDR1P51861 262 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 RBM10P98175 930 aaKnown RBP6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CLCQ05315 142 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 TMEM62Q0P6H9 643 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MAP3K12Q12852 859 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 TRDNQ13061 729 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 LAPTM5Q13571 262 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 KIR3DS1Q14943 382 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SF3A1Q15459 793 aaKnown RBP6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SLC10A5Q5PT55 438 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 NT5DC1Q5TFE4 455 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 REXO1Q8N1G1 1221 aaKnown RBP6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 LCORLQ8N3X6 602 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 AOPEPQ8N6M6 819 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 ZNF384Q8TF68 577 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MZB1Q8WU39 189 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CDADC1Q9BWV3 514 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 KRT23Q9C075 422 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 ARMT1Q9H993 441 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 INCENPQ9NQS7 918 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 GFOD1Q9NXC2 390 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 GGT7Q9UJ14 662 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 FBXL21Q9UKT6 434 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 PCDHB12Q9Y5F1 795 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 BAZ2AQ9UIF9 1905 aaKnown RBP6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MYH13Q9UKX3 1938 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SBF2Q86WG5 1849 aa6.76□□□□□ -1.33
TNFRSF1A-206ENST00000535038 KAT6BQ8WYB5 2073 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CCDC69A6NI79 296 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 GOLGA8AA7E2F4 631 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 GOLGA6L19H0YKK7 550 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 UBE2Q2LH0YL09 131 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SNAP23O00161 211 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CPLX1O14810 134 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 PRKAB2O43741 272 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 MMP1P03956 469 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SLC3A2P08195 630 aaKnown RBP6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 NME1P15531 152 aaKnown RBP6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 PRKCAP17252 672 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SYN1P17600 705 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 GUCY1A2P33402 732 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 BMP8BP34820 402 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 IARSP41252 1262 aaKnown RBP6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 SARSP49591 514 aaKnown RBP6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 GSDMDP57764 484 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CCDC152Q4G0S7 254 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 CLEC4GQ6UXB4 293 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 HS2ST1Q7LGA3 356 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 TMC6Q7Z403 805 aa6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 METTL16Q86W50 562 aaKnown RBP6.75□□□□□ -1.33
TNFRSF1A-206ENST00000535038 RAB11FIP4Q86YS3 637 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms