RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 H2AFB2P0C5Z0 115 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 PMLP29590 882 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 FLT3P36888 993 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 TEKQ02763 1124 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 KCNMA1Q12791 1236 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 SKOR2Q2VWA4 1001 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 PLA2G4EQ3MJ16 856 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 PIK3R6Q5UE93 754 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 IQCEQ6IPM2 695 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 LRSAM1Q6UWE0 723 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 UBE2R2Q712K3 238 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 MTDHQ86UE4 582 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 NME9Q86XW9 330 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 ZDHHC13Q8IUH4 622 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 SUGP1Q8IWZ8 645 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 TMEM52Q8NDY8 209 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 PTCHD1Q96NR3 888 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 ORAI3Q9BRQ5 295 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 ATP13A1Q9HD20 1204 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 SAMD15Q9P1V8 674 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 DUSP13Q9UII6 198 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 FLT4P35916 1363 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 TECTAO75443 2155 aa5.89□□□□□ -1.47
ECHDC1-223ENST00000534442 DSPP15924 2871 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 NPHP3-ACAD11A0A0J9YXS1 232 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 PRR19A6NJB7 356 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 ALG1L2C9J202 215 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 S100BP04271 92 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 PAMP19021 973 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 EXOSC10Q01780 885 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 DOC2BQ14184 412 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 CPSF6Q16630 551 aaKnown RBP eCLIP5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 IFI16Q16666 785 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 FRMD5Q7Z6J6 570 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 CPNE8Q86YQ8 564 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 CREG2Q8IUH2 290 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 DNAJC10Q8IXB1 793 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 FAM43AQ8N2R8 423 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 IGSF22Q8N9C0 903 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 NETO1Q8TDF5 533 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 BADQ92934 168 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 CDADC1Q9BWV3 514 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 VPS33BQ9H267 617 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 STK17AQ9UEE5 414 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 ZC3H7BQ9UGR2 993 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 FBXL7Q9UJT9 491 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 G3BP2Q9UN86 482 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 SNX11Q9Y5W9 270 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 NCAPD2Q15021 1401 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 ITPR1Q14643 2758 aa5.88□□□□□ -1.47
ECHDC1-223ENST00000534442 CEP295Q9C0D2 2601 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 SSU72P8A0A1W2PR75 194 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 CBX4O00257 560 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 NEMP1O14524 444 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 GSC2O15499 205 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 CYP26A1O43174 497 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 COL6A1P12109 1028 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 BPIP17213 487 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 NAT1P18440 290 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 PAK1Q13153 545 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 STAT4Q14765 748 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 LRRC41Q15345 812 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 PKN1Q16512 942 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 NKAPLQ5M9Q1 402 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 WWC2Q6AWC2 1192 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 TMPRSS7Q7RTY8 843 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 DDX53Q86TM3 631 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 BRI3BPQ8WY22 251 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 CDIP1Q9H305 208 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 ERVK13-1Q9NX77 482 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 PPARGC1AQ9UBK2 798 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 GABRQQ9UN88 632 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 COQ6Q9Y2Z9 468 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 PCDHA2Q9Y5H9 948 aa5.87□□□□□ -1.47
ECHDC1-223ENST00000534442 PRRC2BQ5JSZ5 2229 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 PLXNA1Q9UIW2 1896 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 TRBV23OR9-2A0A075B6M9 112 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 C7orf72A4D263 438 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 ZNF891A8MT65 544 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 M0R2C6 588 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 WNT9AO14904 365 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 GPR39O43194 453 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 SRGAP2CP0DJJ0 459 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 PHKG2P15735 406 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 CPEP16870 476 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 RPS12P25398 132 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 AMPHP49418 695 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 GUCY2FP51841 1108 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 VCPP55072 806 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 EGR3Q06889 387 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 KIAA2012Q0VF49 1180 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 RSPO4Q2I0M5 234 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 CCDC129Q6ZRS4 1044 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 BMP8AQ7Z5Y6 402 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 NBPF5PQ86XG9 351 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 KIF18BQ86Y91 864 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 ZC3H7AQ8IWR0 971 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 NXPE1Q8N323 547 aa5.86□□□□□ -1.47
ECHDC1-223ENST00000534442 WDR66Q8TBY9 1149 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms