RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 IL13RA1P78552 427 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 MOGSQ13724 837 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 BRD3Q15059 726 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 FSCN1Q16658 493 aaKnown RBP4.46□□□□□ -1.7
CSMD3-210ENST00000534172 GFOD2Q3B7J2 385 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 HSP90AB4PQ58FF6 505 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 SAMD3Q8N6K7 520 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 CDYL2Q8N8U2 506 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 LCORQ96JN0 433 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-210ENST00000534172 MYL10Q9BUA6 226 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 CARD11Q9BXL7 1154 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 IP6K2Q9UHH9 426 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 MRFAP1Q9Y605 127 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 KIF21BO75037 1637 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 TRIM75PA6NK02 468 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 VCAM1P19320 739 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 ENPP1P22413 925 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 DLX2Q07687 328 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-210ENST00000534172 EIF4HQ15056 248 aaKnown RBP4.46□□□□□ -1.7
CSMD3-210ENST00000534172 ZNF568Q3ZCX4 644 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 ZMAT1Q5H9K5 638 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 OTOP2Q7RTS6 562 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 CBARPQ8N350 705 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-210ENST00000534172 ADAMTS17Q8TE56 1095 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 ZSWIM3Q96MP5 696 aa4.46□□□□□ -1.7
CSMD3-210ENST00000534172 LUC7L2Q9Y383 392 aaKnown RBP4.46□□□□□ -1.7
CSMD3-210ENST00000534172 A0A0U1RQG5 324 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-210ENST00000534172 DDX3XO00571 662 aaKnown RBP eCLIP4.45□□□□□ -1.7
CSMD3-210ENST00000534172 FFAR3O14843 346 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 DAPK3O43293 454 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 FSBPO95073 299 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 APOL3O95236 402 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 COL6A1P12109 1028 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 KCNC1P48547 511 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 MEOX1P50221 254 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 SLC5A3P53794 718 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 MANFP55145 182 aaKnown RBP4.45□□□□□ -1.7
CSMD3-210ENST00000534172 TOP3AQ13472 1001 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-210ENST00000534172 TCIRG1Q13488 830 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 USP10Q14694 798 aaKnown RBP4.45□□□□□ -1.7
CSMD3-210ENST00000534172 MYBPC3Q14896 1274 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 RALBP1Q15311 655 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 KLHDC10Q6PID8 442 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 STK32CQ86UX6 486 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 DGKHQ86XP1 1220 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 LMBR1Q8WVP7 490 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 ORAI2Q96SN7 254 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 SLC13A1Q9BZW2 595 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 RBPJLQ9UBG7 517 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 MAP3K4Q9Y6R4 1608 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 MLLT6P55198 1093 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-210ENST00000534172 GJA9P57773 515 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 CD83Q01151 205 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 SPIDRQ14159 915 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 ANO4Q32M45 955 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 LRSAM1Q6UWE0 723 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 TPH2Q8IWU9 490 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 LRRC56Q8IYG6 542 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-210ENST00000534172 RTKN2Q8IZC4 609 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 TXNDC5Q8NBS9 432 aaKnown RBP4.45□□□□□ -1.7
CSMD3-210ENST00000534172 OR5AN1Q8NGI8 311 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 ZCCHC14Q8WYQ9 949 aaKnown RBP4.45□□□□□ -1.7
CSMD3-210ENST00000534172 ZNF496Q96IT1 587 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-210ENST00000534172 ZNF700Q9H0M5 742 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 VTA1Q9NP79 307 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 JADE2Q9NQC1 790 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 POLR3BQ9NW08 1133 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-210ENST00000534172 ADAM29Q9UKF5 820 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 PCDHB6Q9Y5E3 794 aa4.45□□□□□ -1.7
CSMD3-210ENST00000534172 TEX14Q8IWB6 1497 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 MROH6A6NGR9 719 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 OPHN1O60890 802 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 KLHL18O94889 574 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 PFKMP08237 780 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 MYBL2P10244 700 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 IARSP41252 1262 aaKnown RBP4.44□□□□□ -1.7
CSMD3-210ENST00000534172 RGS3P49796 1198 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 SLURP1P55000 103 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 ERVK-21P61565 698 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 NOLC1Q14978 699 aaKnown RBP eCLIP4.44□□□□□ -1.7
CSMD3-210ENST00000534172 SPTY2D1Q68D10 685 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-210ENST00000534172 CXorf57Q6NSI4 855 aaKnown RBP4.44□□□□□ -1.7
CSMD3-210ENST00000534172 OR14C36Q8NHC7 312 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 AUTS2Q8WXX7 1259 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 IL17RAQ96F46 866 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 NOL10Q9BSC4 688 aaKnown RBP4.44□□□□□ -1.7
CSMD3-210ENST00000534172 TOPORSQ9NS56 1045 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-210ENST00000534172 OBP2AQ9NY56 170 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 PRSS38A1L453 326 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 VSTM5A8MXK1 200 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 SASH1O94885 1247 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 CT47B1P0C2W7 299 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-210ENST00000534172 MEF2AQ02078 507 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-210ENST00000534172 SAFB2Q14151 953 aaKnown RBP eCLIP4.44□□□□□ -1.7
CSMD3-210ENST00000534172 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.44□□□□□ -1.7
CSMD3-210ENST00000534172 INAVAQ3KP66 663 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 C4orf46Q504U0 113 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 SVIPQ8NHG7 77 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 FATE1Q969F0 183 aa4.44□□□□□ -1.7
CSMD3-210ENST00000534172 FUBP3Q96I24 572 aaKnown RBP eCLIP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms