RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 KRT35Q92764 455 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 P3H4Q92791 437 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 CCDC17Q96LX7 622 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 PCMTD1Q96MG8 357 aaPredicted RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 RPS6KC1Q96S38 1066 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 EBF2Q9HAK2 575 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 APEX2Q9UBZ4 518 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 FNDC1Q4ZHG4 1894 aaPredicted RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 A0A0G2JS52 829 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 SHTN1A0MZ66 631 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 PHF2O75151 1096 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 RTN2O75298 545 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 XRCC5P13010 732 aaKnown RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 CCNG1P51959 295 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 EIF3BP55884 814 aaKnown RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 MAP3K10Q02779 954 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 ENPEPQ07075 957 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 KLF1Q13351 362 aaPredicted RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 MTMR3Q13615 1198 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 ZC2HC1CQ53FD0 456 aaPredicted RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 TDRD12Q587J7 1177 aaKnown RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 DACT2Q5SW24 774 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 C15orf39Q6ZRI6 1047 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 ARMC9Q7Z3E5 817 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 COL23A1Q86Y22 540 aaPredicted RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 JAMLQ86YT9 394 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 GLYCTKQ8IVS8 523 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 ARHGEF19Q8IW93 802 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 KLHL7Q8IXQ5 586 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 SYCE1Q8N0S2 351 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 ZSWIM2Q8NEG5 633 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 RASSF8Q8NHQ8 419 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 SLC20A1Q8WUM9 679 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 LRRC45Q96CN5 670 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 RBM17Q96I25 401 aaKnown RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 CABS1Q96KC9 395 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 XPO6Q96QU8 1125 aaKnown RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 PSMD1Q99460 953 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 ZSWIM1Q9BR11 485 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 RABEP2Q9H5N1 569 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 LRRC19Q9H756 370 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 ACTR5Q9H9F9 607 aaPredicted RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 KLC4Q9NSK0 619 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 ANKRD62A6NC57 917 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 GCOM1H8Y6P7 765 aaPredicted RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 MEIS1O00470 390 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 FLOT1O75955 427 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 STBD1O95210 358 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 SERPINB2P05120 415 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 GSTA1P08263 222 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 H2AFZP0C0S5 128 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 MYZAPP0CAP1 466 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 LMNB1P20700 586 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 PPP3CAQ08209 521 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 MGAT5Q09328 741 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 PABPC4Q13310 644 aaKnown RBP eCLIP4.79□□□□□ -1.64
CTSC-208ENST00000533897 AUHQ13825 339 aaKnown RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 DRAP1Q14919 205 aaPredicted RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 FAM196AQ6ZSG2 479 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 H2AFVQ71UI9 128 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 C18orf8Q96DM3 657 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 L3MBTL3Q96JM7 780 aaPredicted RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 KREMEN1Q96MU8 473 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 INTS2Q9H0H0 1204 aaKnown RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 SEL1LQ9UBV2 794 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 ODF2LQ9ULJ1 636 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 AGAP1Q9UPQ3 857 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 PCDHA1Q9Y5I3 950 aa4.79□□□□□ -1.64
CTSC-208ENST00000533897 COL4A4P53420 1690 aaPredicted RBP4.79□□□□□ -1.64
CTSC-208ENST00000533897 FOXN3O00409 490 aaPredicted RBP4.78□□□□□ -1.64
CTSC-208ENST00000533897 KRIT1O00522 736 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 RIPK2O43353 540 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 LYPLA2O95372 231 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 GJB6O95452 261 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 NDUFB10O96000 172 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 NMT1P30419 496 aaKnown RBP4.78□□□□□ -1.64
CTSC-208ENST00000533897 HSD17B4P51659 736 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 EIF6P56537 245 aaKnown RBP4.78□□□□□ -1.64
CTSC-208ENST00000533897 MAGOHP61326 146 aaKnown RBP4.78□□□□□ -1.64
CTSC-208ENST00000533897 MPP2Q14168 576 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 CNGA2Q16280 664 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 TRAPPC3LQ5T215 181 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 CYB5D1Q6P9G0 228 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 GOLGA6L1Q8N7Z2 621 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 MAGOHBQ96A72 148 aaKnown RBP4.78□□□□□ -1.64
CTSC-208ENST00000533897 CDK5RAP3Q96JB5 506 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 FBXL18Q96ME1 805 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 CNOT10Q9H9A5 744 aaKnown RBP4.78□□□□□ -1.64
CTSC-208ENST00000533897 CD248Q9HCU0 757 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 RGL1Q9NZL6 768 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 TPX2Q9ULW0 747 aaKnown RBP4.78□□□□□ -1.64
CTSC-208ENST00000533897 TRPC6Q9Y210 931 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 CAPN7Q9Y6W3 813 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 P4HA2O15460 535 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 CEP104O60308 925 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 GGPS1O95749 300 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 ITGBL1O95965 494 aaPredicted RBP4.78□□□□□ -1.64
CTSC-208ENST00000533897 FGGP02679 453 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 RARAP10276 462 aa4.78□□□□□ -1.64
CTSC-208ENST00000533897 CHRM1P11229 460 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms