RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 WRAP73Q9P2S5 460 aaPredicted RBP13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 PCDHGC5Q9Y5F6 944 aa13.87□□□□□ -0.19
CAPRIN1-213ENST00000533562 ATG2AQ2TAZ0 1938 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 DCXO43602 365 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 ZNF623O75123 536 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 SLITRK3O94933 977 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 LARGE1O95461 756 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 ATF7P17544 494 aaPredicted RBP13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 LAMTOR4Q0VGL1 99 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 CTTNQ14247 550 aaKnown RBP13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 SAFBQ15424 915 aaKnown RBP eCLIP13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 DUSP6Q16828 381 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 XKR9Q5GH70 373 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 GLB1LQ6UWU2 654 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 SRGAP1Q7Z6B7 1085 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 DIS3L2Q8IYB7 885 aaKnown RBP13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 ZNF579Q8NAF0 562 aaKnown RBP13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 SMRP1Q8NCR6 262 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 TMEM143Q96AN5 459 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 PGBD4Q96DM1 585 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 FAM105AQ9NUU6 356 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 HCN4Q9Y3Q4 1203 aa13.86□□□□□ -0.19
CAPRIN1-213ENST00000533562 PLXNA4Q9HCM2 1894 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 PRR33A8MZF0 331 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 NEMFO60524 1076 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 JAK2O60674 1132 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 PBX3P40426 434 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 BCAR1P56945 870 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 SPIRE1Q08AE8 756 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 NCBP1Q09161 790 aaKnown RBP13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 MXD4Q14582 209 aaPredicted RBP13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 PCBP1Q15365 356 aaKnown RBP eCLIP13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 PLPP4Q5VZY2 271 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 TMEM184AQ6ZMB5 413 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 SLC39A11Q8N1S5 342 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 TMEM169Q96HH4 297 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 MTRQ99707 1265 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 HSD17B14Q9BPX1 270 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 EIF2AK1Q9BQI3 630 aaKnown RBP13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 TTC12Q9H892 705 aaPredicted RBP13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 C11orf16Q9NQ32 467 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 AGPAT5Q9NUQ2 364 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 RAPGEFL1Q9UHV5 662 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 BARX2Q9UMQ3 279 aaPredicted RBP13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 LIMCH1Q9UPQ0 1083 aa13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 ARIH1Q9Y4X5 557 aaPredicted RBP13.85□□□□□ -0.19
CAPRIN1-213ENST00000533562 FAM86C2PA6NEL3 165 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 ZBTB39O15060 712 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 LYPLA2O95372 231 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 SEC24BO95487 1268 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 GLP2RO95838 553 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 TXKP42681 527 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 RNASELQ05823 741 aaKnown RBP13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 SMC1AQ14683 1233 aaKnown RBP13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 EMC2Q15006 297 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 LONRF3Q496Y0 759 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 NOMO2Q5JPE7 1267 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 FERMT3Q86UX7 667 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 MRPL43Q8N983 215 aaKnown RBP13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 TMEM87AQ8NBN3 555 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 RNF149Q8NC42 400 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 LPPQ93052 612 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 CCDC43Q96MW1 224 aaKnown RBP13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 ANKEF1Q9NU02 776 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 PCDHB2Q9Y5E7 798 aa13.84□□□□□ -0.19
CAPRIN1-213ENST00000533562 HIDE1A8MVS5 230 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 ZC3H11AO75152 810 aaKnown RBP eCLIP13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 OFD1O75665 1012 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 DGAT1O75907 488 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 ERLIN2O94905 339 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 XRCC6P12956 609 aaKnown RBP eCLIP13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 HOXB8P17481 243 aaPredicted RBP13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 PLCB2Q00722 1185 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 POU5F1BQ06416 359 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 TFDP1Q14186 410 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 MRPL10Q7Z7H8 261 aaKnown RBP13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 RNF135Q8IUD6 432 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 CNNM3Q8NE01 707 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 URGCPQ8TCY9 931 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 MTMR9Q96QG7 549 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 LLPHQ9BRT6 129 aaKnown RBP13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 UBN1Q9NPG3 1134 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 BMP2KQ9NSY1 1161 aaPredicted RBP13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 KANSL3Q9P2N6 904 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 STK39Q9UEW8 545 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 INPP5FQ9Y2H2 1132 aa13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 USP15Q9Y4E8 981 aaPredicted RBP13.83□□□□□ -0.2
CAPRIN1-213ENST00000533562 C2orf71A6NGG8 1288 aa13.82□□□□□ -0.2
CAPRIN1-213ENST00000533562 NT5C1B-RDH14C9J2C7 533 aa13.82□□□□□ -0.2
CAPRIN1-213ENST00000533562 CXCL14O95715 111 aa13.82□□□□□ -0.2
CAPRIN1-213ENST00000533562 AXLP30530 894 aa13.82□□□□□ -0.2
CAPRIN1-213ENST00000533562 HOXA11P31270 313 aaPredicted RBP13.82□□□□□ -0.2
CAPRIN1-213ENST00000533562 TECP42680 631 aa13.82□□□□□ -0.2
CAPRIN1-213ENST00000533562 FOSBP53539 338 aa13.82□□□□□ -0.2
CAPRIN1-213ENST00000533562 KCNC3Q14003 757 aa13.82□□□□□ -0.2
CAPRIN1-213ENST00000533562 GIT2Q14161 759 aa13.82□□□□□ -0.2
CAPRIN1-213ENST00000533562 HERC4Q5GLZ8 1057 aaPredicted RBP13.82□□□□□ -0.2
CAPRIN1-213ENST00000533562 LLGL2Q6P1M3 1020 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms