RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 OR2W6PQ8NHA6 318 aa13.34□□□□□ -0.27
RAD50-209ENST00000533482 TCP11Q8WWU5 503 aa13.34□□□□□ -0.27
RAD50-209ENST00000533482 EDEM3Q9BZQ6 932 aa13.34□□□□□ -0.27
RAD50-209ENST00000533482 GPRC5CQ9NQ84 441 aa13.34□□□□□ -0.27
RAD50-209ENST00000533482 TTC7AQ9ULT0 858 aaPredicted RBP13.34□□□□□ -0.27
RAD50-209ENST00000533482 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.34□□□□□ -0.27
RAD50-209ENST00000533482 SSU72P8A0A1W2PR75 194 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 GLE1Q53GS7 698 aaKnown RBP13.33□□□□□ -0.28
RAD50-209ENST00000533482 NBPF12Q5TAG4 269 aaPredicted RBP13.33□□□□□ -0.28
RAD50-209ENST00000533482 DAGLBQ8NCG7 672 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 KIAA0895Q8NCT3 520 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 RUNDC3BQ96NL0 473 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.33□□□□□ -0.287e-7■■□□□ 12.1
RAD50-209ENST00000533482 JPH1Q9HDC5 661 aaPredicted RBP13.33□□□□□ -0.28
RAD50-209ENST00000533482 MAD1L1Q9Y6D9 718 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 WDR46O15213 610 aaKnown RBP13.33□□□□□ -0.28
RAD50-209ENST00000533482 ARP10275 920 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 RPA1P27694 616 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 YWHAGP61981 247 aaKnown RBP eCLIP13.33□□□□□ -0.28
RAD50-209ENST00000533482 GUCY1A3Q02108 690 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 ITIH3Q06033 890 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 CUL1Q13616 776 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 TMED2Q15363 201 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 FUT8Q9BYC5 575 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.33□□□□□ -0.28
RAD50-209ENST00000533482 SEPT10Q9P0V9 454 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 SLC9A2Q9UBY0 812 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 DMGDHQ9UI17 866 aaKnown RBP13.33□□□□□ -0.28
RAD50-209ENST00000533482 FBXL5Q9UKA1 691 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 NFIBO00712 420 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 COPB2P35606 906 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 PSMC6P62333 389 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 ZNF568Q3ZCX4 644 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 PACSIN1Q9BY11 444 aa13.33□□□□□ -0.28
RAD50-209ENST00000533482 ABT1Q9ULW3 272 aaKnown RBP13.33□□□□□ -0.28
RAD50-209ENST00000533482 TLR3O15455 904 aaKnown RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 TTI1O43156 1089 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 CAP2P40123 477 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 SEMA3FQ13275 785 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 PPP2R5CQ13362 524 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 EPC2Q52LR7 807 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 FAM133BQ5BKY9 247 aaKnown RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 CFAP157Q5JU67 520 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 ANKRD20A3Q5VUR7 823 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 CEP128Q6ZU80 1094 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 CATSPER4Q7RTX7 472 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 GLIS3Q8NEA6 775 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 CCDC110Q8TBZ0 833 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 C1orf54Q8WWF1 131 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 PSPC1Q8WXF1 523 aaKnown RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 HEXIM2Q96MH2 286 aaKnown RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 RUSC1Q9BVN2 902 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 NUP85Q9BW27 656 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 ARHGAP20Q9P2F6 1191 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 PEAK1Q9H792 1746 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 GGPS1O95749 300 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 FMO5P49326 533 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 HERVK_113P62684 666 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 SHROOM1Q2M3G4 852 aaPredicted RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 NT5DC1Q5TFE4 455 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 NME8Q8N427 588 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 RNF149Q8NC42 400 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 ZNF564Q8TBZ8 553 aaPredicted RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 TBC1D31Q96DN5 1066 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 RNPC3Q96LT9 517 aaKnown RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 SPATA33Q96N06 139 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 TRIM51Q9BSJ1 452 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 AP5M1Q9H0R1 490 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 TAF1DQ9H5J8 278 aaPredicted RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 RPF1Q9H9Y2 349 aaKnown RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 WDR91A4D1P6 747 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 RHBDL3P58872 404 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 ATP11AP98196 1134 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 OR6B2Q6IFH4 312 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 KCNK18Q7Z418 384 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 RFX6Q8HWS3 928 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 CCDC197Q8NCU1 140 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 SLC17A8Q8NDX2 589 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 RFFLQ8WZ73 363 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 JPH2Q9BR39 696 aaPredicted RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 BASP1P80723 227 aaKnown RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 E2F5Q15329 346 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 E2F4Q16254 413 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 CENPPQ6IPU0 288 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 MCUR1Q96AQ8 359 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 RPS6KC1Q96S38 1066 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 DNAJC7Q99615 494 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 MTRQ99707 1265 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 ADAM33Q9BZ11 813 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 ZWILCHQ9H900 591 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 NGRNQ9NPE2 291 aaKnown RBP13.32□□□□□ -0.28
RAD50-209ENST00000533482 SEL1LQ9UBV2 794 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 FBXO40Q9UH90 709 aa13.32□□□□□ -0.28
RAD50-209ENST00000533482 RGPD8O14715 1765 aaPredicted RBP13.31□□□□□ -0.28
RAD50-209ENST00000533482 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
RAD50-209ENST00000533482 CYP2C19P33261 490 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 CCDC38Q502W7 563 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 SLC35G2Q8TBE7 412 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 LPAR1Q92633 364 aa13.31□□□□□ -0.28
RAD50-209ENST00000533482 DUSP9Q99956 384 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms