RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 CDCA2Q69YH5 1023 aaPredicted RBP23.26■■□□□ 1.31
PTP4A2-215ENST00000533408 ZNF720Q7Z2F6 126 aa23.26■■□□□ 1.31
PTP4A2-215ENST00000533408 HAUS6Q7Z4H7 955 aa23.26■■□□□ 1.31
PTP4A2-215ENST00000533408 KSR1Q8IVT5 923 aa23.26■■□□□ 1.31
PTP4A2-215ENST00000533408 C7orf61Q8IZ16 206 aa23.26■■□□□ 1.31
PTP4A2-215ENST00000533408 RPUSD2Q8IZ73 545 aaKnown RBP23.26■■□□□ 1.31
PTP4A2-215ENST00000533408 PRIMPOLQ96LW4 560 aa23.26■■□□□ 1.31
PTP4A2-215ENST00000533408 IFT122Q9HBG6 1241 aa23.26■■□□□ 1.31
PTP4A2-215ENST00000533408 PRMT7Q9NVM4 692 aaPredicted RBP23.26■■□□□ 1.31
PTP4A2-215ENST00000533408 EXOC7Q9UPT5 735 aa23.26■■□□□ 1.31
PTP4A2-215ENST00000533408 INO80B-WBP1J3KQ70 363 aa23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 K7ENM7 598 aa23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 RPS6KA5O75582 802 aa23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 ERLIN2O94905 339 aa23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 PRR29P0C7W0 189 aa23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 SARSP49591 514 aaKnown RBP23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 MGAT3Q09327 533 aa23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 APBB1IPQ7Z5R6 666 aaPredicted RBP23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 WNT8BQ93098 351 aa23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 OSMRQ99650 979 aa23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 PPP1R12CQ9BZL4 782 aa23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 POLD4Q9HCU8 107 aa23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 ARHGAP28Q9P2N2 729 aa23.25■■□□□ 1.31
PTP4A2-215ENST00000533408 EIF3DO15371 548 aaKnown RBP eCLIP23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 SLC16A4O15374 487 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 KLRC4O43908 158 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 GCNT3O95395 438 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 PFKMP08237 780 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 CASP1P29466 404 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 AXLP30530 894 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 GTF2BQ00403 316 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 EHHADHQ08426 723 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 STIM1Q13586 685 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 FBXO47Q5MNV8 452 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 MFSD5Q6N075 450 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 TSHZ1Q6ZSZ6 1077 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 TMEM161BQ8NDZ6 487 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 BSNDQ8WZ55 320 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 APBB2Q92870 758 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 LBHD1Q9BQE6 289 aaPredicted RBP23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 TMEM206Q9H813 350 aa23.24■■□□□ 1.31
PTP4A2-215ENST00000533408 DENND3A2RUS2 1198 aa23.23■■□□□ 1.31
PTP4A2-215ENST00000533408 PAK2Q13177 524 aa23.23■■□□□ 1.31
PTP4A2-215ENST00000533408 FAM187BQ17R55 369 aa23.23■■□□□ 1.31
PTP4A2-215ENST00000533408 ZNF658Q5TYW1 1059 aaPredicted RBP23.23■■□□□ 1.31
PTP4A2-215ENST00000533408 CAVIN1Q6NZI2 390 aaKnown RBP23.23■■□□□ 1.31
PTP4A2-215ENST00000533408 CATSPER4Q7RTX7 472 aa23.23■■□□□ 1.31
PTP4A2-215ENST00000533408 ACCSQ96QU6 501 aa23.23■■□□□ 1.31
PTP4A2-215ENST00000533408 PPP1R16BQ96T49 567 aa23.23■■□□□ 1.31
PTP4A2-215ENST00000533408 RNF216Q9NWF9 866 aaPredicted RBP23.23■■□□□ 1.31
PTP4A2-215ENST00000533408 UBE4BO95155 1302 aa23.23■■□□□ 1.31
PTP4A2-215ENST00000533408 CYP2C18P33260 490 aa23.22■■□□□ 1.31
PTP4A2-215ENST00000533408 RGS19P49795 217 aa23.22■■□□□ 1.31
PTP4A2-215ENST00000533408 HSP90AA2PQ14568 343 aaPredicted RBP23.22■■□□□ 1.31
PTP4A2-215ENST00000533408 SASS6Q6UVJ0 657 aa23.22■■□□□ 1.31
PTP4A2-215ENST00000533408 SEPT8Q92599 483 aa23.22■■□□□ 1.31
PTP4A2-215ENST00000533408 FTHL17Q9BXU8 183 aa23.22■■□□□ 1.31
PTP4A2-215ENST00000533408 MRPL4Q9BYD3 311 aaKnown RBP23.22■■□□□ 1.31
PTP4A2-215ENST00000533408 FZD8Q9H461 694 aa23.22■■□□□ 1.31
PTP4A2-215ENST00000533408 CHST12Q9NRB3 414 aa23.22■■□□□ 1.31
PTP4A2-215ENST00000533408 TRIM43BA6NCK2 446 aa23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 ACKR2O00590 384 aa23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 MBTD1Q05BQ5 628 aa23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 PPIGQ13427 754 aaKnown RBP eCLIP23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 TMEM132AQ24JP5 1023 aa23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 PPP4R3CPQ6ZMV5 832 aa23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 RBM43Q6ZSC3 357 aaKnown RBP23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 TRIM43Q96BQ3 446 aaPredicted RBP23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 ANP32EQ9BTT0 268 aa23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 CDHR5Q9HBB8 845 aa23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 SLC39A2Q9NP94 309 aa23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 TBC1D7Q9P0N9 293 aa23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 DACH1Q9UI36 760 aa23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 TBX20Q9UMR3 447 aa23.21■■□□□ 1.31
PTP4A2-215ENST00000533408 PRKCBP05771 671 aa23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 ZSCAN20P17040 1043 aaPredicted RBP23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 NMT1P30419 496 aaKnown RBP23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 CCL23P55773 120 aa23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 SNRPFP62306 86 aaKnown RBP23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 PRPF4BQ13523 1007 aaKnown RBP23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 LPIN1Q14693 890 aa23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 COBLL1Q53SF7 1204 aa23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 L1TD1Q5T7N2 865 aaKnown RBP23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 TRAF7Q6Q0C0 670 aa23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 ZPBP2Q6X784 338 aa23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 MYOCDQ8IZQ8 938 aa23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 SYCP3Q8IZU3 236 aa23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 ZNF507Q8TCN5 953 aa23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 CCDC51Q96ER9 411 aa23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 ZNF668Q96K58 619 aaPredicted RBP23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 CGNQ9P2M7 1197 aaKnown RBP23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 MAN1B1Q9UKM7 699 aa23.2■■□□□ 1.3
PTP4A2-215ENST00000533408 EFCAB14O75071 495 aa23.19■■□□□ 1.3
PTP4A2-215ENST00000533408 GHRP10912 638 aa23.19■■□□□ 1.3
PTP4A2-215ENST00000533408 ACTN1P12814 892 aa23.19■■□□□ 1.3
PTP4A2-215ENST00000533408 NFX1Q12986 1120 aaKnown RBP23.19■■□□□ 1.3
PTP4A2-215ENST00000533408 GUF1Q8N442 669 aaKnown RBP23.19■■□□□ 1.3
PTP4A2-215ENST00000533408 MLKLQ8NB16 471 aa23.19■■□□□ 1.3
PTP4A2-215ENST00000533408 GOLGA5Q8TBA6 731 aa23.19■■□□□ 1.3
PTP4A2-215ENST00000533408 BICD1Q96G01 975 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms