RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 NAMPTP43490 491 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 UBE3AQ05086 875 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 COL19A1Q14993 1142 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 SF3A1Q15459 793 aaKnown RBP10.92□□□□□ -0.66
NUP98-220ENST00000533346 AMHR2Q16671 573 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 CSPP1Q1MSJ5 1256 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 CATSPER4Q7RTX7 472 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 ASAP3Q8TDY4 903 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 MRPL38Q96DV4 380 aaKnown RBP10.92□□□□□ -0.66
NUP98-220ENST00000533346 NLRP4Q96MN2 994 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 SCLT1Q96NL6 688 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 CASD1Q96PB1 797 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 NTPCRQ9BSD7 190 aaKnown RBP10.92□□□□□ -0.66
NUP98-220ENST00000533346 C11orf84Q9BUA3 381 aaPredicted RBP10.92□□□□□ -0.66
NUP98-220ENST00000533346 CCSER1Q9C0I3 900 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 FZD8Q9H461 694 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 CWH43Q9H720 699 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 CERS4Q9HA82 394 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 FAM105AQ9NUU6 356 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 DDX19AQ9NUU7 478 aaKnown RBP10.92□□□□□ -0.66
NUP98-220ENST00000533346 DNM3Q9UQ16 869 aa10.92□□□□□ -0.66
NUP98-220ENST00000533346 PRRC2BQ5JSZ5 2229 aaKnown RBP10.92□□□□□ -0.66
NUP98-220ENST00000533346 A0A1B0GUA9 196 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 ARHGEF35A5YM69 484 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 SRGAP2CP0DJJ0 459 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 FGFR4P22455 802 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 GUCY2CP25092 1073 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 MBTD1Q05BQ5 628 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 GPM6BQ13491 265 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 PPP2R5AQ15172 486 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 PTPROQ16827 1216 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 TMEM119Q4V9L6 283 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 UBXN11Q5T124 520 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 FAM102BQ5T8I3 360 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 C1orf186Q6ZWK4 172 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 HSCBQ8IWL3 235 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 SYT2Q8N9I0 419 aaPredicted RBP10.91□□□□□ -0.66
NUP98-220ENST00000533346 ATXN2LQ8WWM7 1075 aaKnown RBP10.91□□□□□ -0.66
NUP98-220ENST00000533346 KIFAP3Q92845 792 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 PGBD4Q96DM1 585 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 ZNF668Q96K58 619 aaPredicted RBP10.91□□□□□ -0.66
NUP98-220ENST00000533346 CCDC43Q96MW1 224 aaKnown RBP10.91□□□□□ -0.66
NUP98-220ENST00000533346 PNMA5Q96PV4 448 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 POLR3FQ9H1D9 316 aaPredicted RBP10.91□□□□□ -0.66
NUP98-220ENST00000533346 C2orf40Q9H1Z8 148 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 BHMT2Q9H2M3 363 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 AAASQ9NRG9 546 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 PRMT7Q9NVM4 692 aaPredicted RBP10.91□□□□□ -0.66
NUP98-220ENST00000533346 COG5Q9UP83 839 aa10.91□□□□□ -0.66
NUP98-220ENST00000533346 MRPL42Q9Y6G3 142 aaKnown RBP10.91□□□□□ -0.66
NUP98-220ENST00000533346 PHLPP2Q6ZVD8 1323 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 CNTNAP2Q9UHC6 1331 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 VPS37CA5D8V6 355 aaPredicted RBP10.9□□□□□ -0.66
NUP98-220ENST00000533346 VWA3AA6NCI4 1184 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 E9PMD0 336 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 TSPAN1O60635 241 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 USO1O60763 962 aaKnown RBP10.9□□□□□ -0.66
NUP98-220ENST00000533346 CSDE1O75534 798 aaKnown RBP10.9□□□□□ -0.66
NUP98-220ENST00000533346 NCLP19338 710 aaKnown RBP10.9□□□□□ -0.66
NUP98-220ENST00000533346 IGFBP4P22692 258 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 PLCB3Q01970 1234 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 NCBP1Q09161 790 aaKnown RBP10.9□□□□□ -0.66
NUP98-220ENST00000533346 CLLU1OSQ5K130 101 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 RINT1Q6NUQ1 792 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 NOTUMQ6P988 496 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 LRRC55Q6ZSA7 311 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 LRRC43Q8N309 656 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 SPPL3Q8TCT6 385 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 MRPL9Q9BYD2 267 aaKnown RBP10.9□□□□□ -0.66
NUP98-220ENST00000533346 CCDC113Q9H0I3 377 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 TMEM134Q9H6X4 195 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 UBN1Q9NPG3 1134 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 TYW1Q9NV66 732 aaKnown RBP10.9□□□□□ -0.66
NUP98-220ENST00000533346 PLAGL2Q9UPG8 496 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 PIN4Q9Y237 131 aaKnown RBP10.9□□□□□ -0.66
NUP98-220ENST00000533346 LZTS1Q9Y250 596 aa10.9□□□□□ -0.66
NUP98-220ENST00000533346 SRPRBQ9Y5M8 271 aaKnown RBP10.9□□□□□ -0.66
NUP98-220ENST00000533346 TDRD15B5MCY1 1934 aaKnown RBP10.9□□□□□ -0.67
NUP98-220ENST00000533346 REV3LO60673 3130 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 A0A087WWV3 80 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.89□□□□□ -0.67
NUP98-220ENST00000533346 TBKBP1A7MCY6 615 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 PP2D1A8MPX8 630 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 ACKR2O00590 384 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 NCK2O43639 380 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 OFD1O75665 1012 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 ERLIN2O94905 339 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 ARF4P18085 180 aaPredicted RBP10.89□□□□□ -0.67
NUP98-220ENST00000533346 LAG3P18627 525 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 SCP2P22307 547 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 CDC25AP30304 524 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 CTNNB1P35222 781 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 NASPP49321 788 aaPredicted RBP10.89□□□□□ -0.67
NUP98-220ENST00000533346 EFNA5P52803 228 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 SLC12A3P55017 1021 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 CAMK1Q14012 370 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 SLC39A14Q15043 492 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 TIGD5Q53EQ6 642 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 ATL3Q6DD88 541 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 TWF2Q6IBS0 349 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms