RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 ATP6V0A4Q9HBG4 840 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 XPNPEP1Q9NQW7 623 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 FBXO2Q9UK22 296 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 DBR1Q9UK59 544 aaKnown RBP14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 PRUNE2Q8WUY3 3088 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 EYSQ5T1H1 3165 aa14.38□□□□□ -0.11
TRAPPC4-212ENST00000533058 LOXHD1Q8IVV2 1947 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 PPP6R2O75170 966 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 MED24O75448 989 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 CTNNB1P35222 781 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 TXLNAP40222 546 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 LAMTOR4Q0VGL1 99 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 POTEGQ6S5H5 508 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 ZNF598Q86UK7 904 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 CABP7Q86V35 215 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 ECHDC2Q86YB7 292 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 IFNLR1Q8IU57 520 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 LEO1Q8WVC0 666 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 TMEM143Q96AN5 459 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 CALML4Q96GE6 196 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 ZNF668Q96K58 619 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 PLIN2Q99541 437 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 SCAND2PQ9GZW5 306 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 TMEM117Q9H0C3 514 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 PRDM6Q9NQX0 595 aa14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 MRPL42Q9Y6G3 142 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-212ENST00000533058 A0A087WWV3 80 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 CUTAO60888 179 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 ZNF623O75123 536 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 SKIP12755 728 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 ARL2P36404 184 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 MRPS5P82675 430 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 AAK1Q2M2I8 961 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 TIGD5Q53EQ6 642 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 TJAP1Q5JTD0 557 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 FAM102BQ5T8I3 360 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 KSR1Q8IVT5 923 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 MICALL1Q8N3F8 863 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 PIGOQ8TEQ8 1089 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 SYMPKQ92797 1274 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 NLRP4Q96MN2 994 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 ASB2Q96Q27 587 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 NFKBIZQ9BYH8 718 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 GDPD2Q9HCC8 539 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 DDX19AQ9NUU7 478 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 RCOR1Q9UKL0 485 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 KIAA1024Q9UPX6 916 aa14.36□□□□□ -0.11
TRAPPC4-212ENST00000533058 UNC80Q8N2C7 3258 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 TBKBP1A7MCY6 615 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 CSDE1O75534 798 aaKnown RBP14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 SRGAP2CP0DJJ0 459 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 FGFR4P22455 802 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 RAB27AP51159 221 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 PTENP60484 403 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 TFDP1Q14186 410 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 CSPP1Q1MSJ5 1256 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 CATSPER4Q7RTX7 472 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 KCTD17Q8N5Z5 321 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 HLA-CQ95604 372 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 NT5C3AQ9H0P0 336 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 AAASQ9NRG9 546 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 AGPAT5Q9NUQ2 364 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 RNF19AQ9NV58 838 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 CCDC39Q9UFE4 941 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 PCDHA7Q9UN72 937 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 PLAGL2Q9UPG8 496 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 DNM3Q9UQ16 869 aa14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 MORC2Q9Y6X9 1032 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-212ENST00000533058 RALGAPA2Q2PPJ7 1873 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 ARHGEF35A5YM69 484 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 GOLGA6L4A6NEF3 574 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 DLL1O00548 723 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 GRM6O15303 877 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 SSBP05455 408 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 FGFR1P11362 822 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 ATF7P17544 494 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 AXLP30530 894 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 HOXA11P31270 313 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 PHKA2P46019 1235 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 GATMP50440 423 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 COL19A1Q14993 1142 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 KARSQ15046 597 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 SKIV2LQ15477 1246 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 PAN2Q504Q3 1202 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 RNF149Q8NC42 400 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 MCPH1Q8NEM0 835 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 EPSTI1Q96J88 318 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 CASD1Q96PB1 797 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 MMTAG2Q9BU76 263 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 COL25A1Q9BXS0 654 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 BMP2KQ9NSY1 1161 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 TYW1Q9NV66 732 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 PIN4Q9Y237 131 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 PCDHB12Q9Y5F1 795 aa14.34□□□□□ -0.11
TRAPPC4-212ENST00000533058 CARNS1A5YM72 827 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 NCK2O43639 380 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 ITGB1P05556 798 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 LAG3P18627 525 aa14.33□□□□□ -0.12
TRAPPC4-212ENST00000533058 UBE3AQ05086 875 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms