RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 RESTQ13127 1097 aa17.05■□□□□ 0.32
CPSF1-210ENST00000532935 PCBP1Q15365 356 aaKnown RBP eCLIP17.05■□□□□ 0.32
CPSF1-210ENST00000532935 PTPROQ16827 1216 aa17.05■□□□□ 0.32
CPSF1-210ENST00000532935 MRPL38Q96DV4 380 aaKnown RBP17.05■□□□□ 0.32
CPSF1-210ENST00000532935 CASD1Q96PB1 797 aa17.05■□□□□ 0.32
CPSF1-210ENST00000532935 PLVAPQ9BX97 442 aa17.05■□□□□ 0.32
CPSF1-210ENST00000532935 NFKBIZQ9BYH8 718 aa17.05■□□□□ 0.32
CPSF1-210ENST00000532935 TMEM117Q9H0C3 514 aa17.05■□□□□ 0.32
CPSF1-210ENST00000532935 FAM105AQ9NUU6 356 aa17.05■□□□□ 0.32
CPSF1-210ENST00000532935 DNM3Q9UQ16 869 aa17.05■□□□□ 0.32
CPSF1-210ENST00000532935 BRWD1Q9NSI6 2320 aa17.05■□□□□ 0.32
CPSF1-210ENST00000532935 E9PMD0 336 aa17.04■□□□□ 0.32
CPSF1-210ENST00000532935 INO80B-WBP1J3KQ70 363 aa17.04■□□□□ 0.32
CPSF1-210ENST00000532935 ERLIN2O94905 339 aa17.04■□□□□ 0.32
CPSF1-210ENST00000532935 EYA4O95677 639 aa17.04■□□□□ 0.32
CPSF1-210ENST00000532935 SKIP12755 728 aa17.04■□□□□ 0.32
CPSF1-210ENST00000532935 HOXA11P31270 313 aaPredicted RBP17.04■□□□□ 0.32
CPSF1-210ENST00000532935 MBTD1Q05BQ5 628 aa17.04■□□□□ 0.32
CPSF1-210ENST00000532935 SF3A1Q15459 793 aaKnown RBP17.04■□□□□ 0.32
CPSF1-210ENST00000532935 CLLU1OSQ5K130 101 aa17.04■□□□□ 0.32
CPSF1-210ENST00000532935 SPOUT1Q5T280 376 aaKnown RBP17.04■□□□□ 0.32
CPSF1-210ENST00000532935 ABI1Q8IZP0 508 aa17.04■□□□□ 0.32
CPSF1-210ENST00000532935 TYW1Q9NV66 732 aaKnown RBP17.04■□□□□ 0.32
CPSF1-210ENST00000532935 MTMR6Q9Y217 621 aa17.04■□□□□ 0.32
CPSF1-210ENST00000532935 LRRIQ4A6NIV6 560 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 GRM6O15303 877 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 STX6O43752 255 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 TSPAN1O60635 241 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 ZNF623O75123 536 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 RAB27AP51159 221 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 SKIV2LQ15477 1246 aaKnown RBP17.03■□□□□ 0.32
CPSF1-210ENST00000532935 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
CPSF1-210ENST00000532935 NAALADL2Q58DX5 795 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 HYIQ5T013 277 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 KCNK18Q7Z418 384 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 HELQQ8TDG4 1101 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 P2RX5Q93086 422 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 AK8Q96MA6 479 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 PNMA5Q96PV4 448 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 CWH43Q9H720 699 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 HCSTQ9UBK5 93 aa17.03■□□□□ 0.32
CPSF1-210ENST00000532935 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
CPSF1-210ENST00000532935 TDRD15B5MCY1 1934 aaKnown RBP17.02■□□□□ 0.32
CPSF1-210ENST00000532935 AXLP30530 894 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 AMHR2Q16671 573 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 UBXN11Q5T124 520 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 CDCA2Q69YH5 1023 aaPredicted RBP17.02■□□□□ 0.32
CPSF1-210ENST00000532935 LRRC55Q6ZSA7 311 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 LRRC43Q8N309 656 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 KLHL23Q8NBE8 558 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 BSNDQ8WZ55 320 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 LPPQ93052 612 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 CPB2Q96IY4 423 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 NT5C3AQ9H0P0 336 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 LMAN2LQ9H0V9 348 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 ALG13Q9NP73 1137 aaKnown RBP17.02■□□□□ 0.32
CPSF1-210ENST00000532935 AAASQ9NRG9 546 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 THEGQ9P2T0 379 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 PLAGL2Q9UPG8 496 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 PCDHB2Q9Y5E7 798 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 PCDHB12Q9Y5F1 795 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 CLIC4Q9Y696 253 aa17.02■□□□□ 0.32
CPSF1-210ENST00000532935 ITGB1P05556 798 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 HSP90AA1P07900 732 aaKnown RBP17.01■□□□□ 0.31
CPSF1-210ENST00000532935 LAG3P18627 525 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
CPSF1-210ENST00000532935 LONRF3Q496Y0 759 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 TIGD5Q53EQ6 642 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 FAM173BQ6P4H8 233 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 NOTUMQ6P988 496 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 CABP7Q86V35 215 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 ZBTB8OSQ8IWT0 167 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 KCTD17Q8N5Z5 321 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 COLGALT1Q8NBJ5 622 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 KIFAP3Q92845 792 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 PGBD4Q96DM1 585 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 CCDC51Q96ER9 411 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 CDK5RAP3Q96JB5 506 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 C2orf40Q9H1Z8 148 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 ZSCAN16Q9H4T2 348 aaPredicted RBP17.01■□□□□ 0.31
CPSF1-210ENST00000532935 POLD4Q9HCU8 107 aa17.01■□□□□ 0.31
CPSF1-210ENST00000532935 MEIS3P2A8K0S8 358 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 B4GALT5O43286 388 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 SLC26A4O43511 780 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 ARF4P18085 180 aaPredicted RBP17■□□□□ 0.31
CPSF1-210ENST00000532935 LONP1P36776 959 aaKnown RBP17■□□□□ 0.31
CPSF1-210ENST00000532935 NAMPTP43490 491 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 GRIN1Q05586 938 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 PPP2R5AQ15172 486 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 PTPAQ15257 358 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 TMEM119Q4V9L6 283 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 GLB1LQ6UWU2 654 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 MRPL10Q7Z7H8 261 aaKnown RBP17■□□□□ 0.31
CPSF1-210ENST00000532935 SPPL3Q8TCT6 385 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 RSPH1Q8WYR4 309 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 IFT74Q96LB3 600 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 PLIN2Q99541 437 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 RUSC1Q9BVN2 902 aa17■□□□□ 0.31
CPSF1-210ENST00000532935 MRPL9Q9BYD2 267 aaKnown RBP17■□□□□ 0.31
CPSF1-210ENST00000532935 PRMT7Q9NVM4 692 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms