RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 PPP2R2AP63151 447 aa19.48■□□□□ 0.71
UBXN1-213ENST00000532904 IFT88Q13099 833 aa19.48■□□□□ 0.71
UBXN1-213ENST00000532904 TCERG1LQ5VWI1 586 aa19.48■□□□□ 0.71
UBXN1-213ENST00000532904 DAAM2Q86T65 1068 aa19.48■□□□□ 0.71
UBXN1-213ENST00000532904 APOBEC3FQ8IUX4 373 aaKnown RBP19.48■□□□□ 0.71
UBXN1-213ENST00000532904 POLR3CQ9BUI4 534 aaPredicted RBP19.48■□□□□ 0.71
UBXN1-213ENST00000532904 MEIS1O00470 390 aa19.48■□□□□ 0.71
UBXN1-213ENST00000532904 TTI1O43156 1089 aa19.48■□□□□ 0.71
UBXN1-213ENST00000532904 CASP4P49662 377 aa19.48■□□□□ 0.71
UBXN1-213ENST00000532904 POU5F1Q01860 360 aaKnown RBP19.48■□□□□ 0.71
UBXN1-213ENST00000532904 SLC30A5Q8TAD4 765 aa19.48■□□□□ 0.71
UBXN1-213ENST00000532904 OLIG1Q8TAK6 271 aa19.48■□□□□ 0.71
UBXN1-213ENST00000532904 U2AF1L4Q8WU68 220 aaKnown RBP19.48■□□□□ 0.71
UBXN1-213ENST00000532904 ZNF536O15090 1300 aa19.48■□□□□ 0.71
UBXN1-213ENST00000532904 MNAT1P51948 309 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 GALCP54803 685 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 LNX1Q8TBB1 728 aaPredicted RBP19.47■□□□□ 0.71
UBXN1-213ENST00000532904 WDR18Q9BV38 432 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 MAP3K20Q9NYL2 800 aaKnown RBP19.47■□□□□ 0.71
UBXN1-213ENST00000532904 AMFRQ9UKV5 643 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 NCANO14594 1321 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 ZNF541Q9H0D2 1346 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 RBBP6Q7Z6E9 1792 aaKnown RBP19.47■□□□□ 0.71
UBXN1-213ENST00000532904 PARP14Q460N5 1801 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 FDX1P10109 184 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 STAT1P42224 750 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 SPDYCQ5MJ68 293 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 GJB7Q6PEY0 223 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 BORCS6Q96GS4 357 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 CNOT8Q9UFF9 292 aaKnown RBP19.47■□□□□ 0.71
UBXN1-213ENST00000532904 DDX20Q9UHI6 824 aaKnown RBP19.47■□□□□ 0.71
UBXN1-213ENST00000532904 CCPG1Q9ULG6 757 aa19.47■□□□□ 0.71
UBXN1-213ENST00000532904 DIS3Q9Y2L1 958 aaKnown RBP19.47■□□□□ 0.71
UBXN1-213ENST00000532904 UTP11Q9Y3A2 253 aaKnown RBP19.47■□□□□ 0.71
UBXN1-213ENST00000532904 ASTN2O75129 1339 aaPredicted RBP19.46■□□□□ 0.71
UBXN1-213ENST00000532904 GOLGB1Q14789 3259 aaKnown RBP19.46■□□□□ 0.71
UBXN1-213ENST00000532904 C5orf60A6NFR6 353 aa19.46■□□□□ 0.71
UBXN1-213ENST00000532904 F8VZ95 297 aa19.46■□□□□ 0.71
UBXN1-213ENST00000532904 MCF2L2Q86YR7 1114 aa19.46■□□□□ 0.71
UBXN1-213ENST00000532904 SLC5A5Q92911 643 aa19.46■□□□□ 0.71
UBXN1-213ENST00000532904 BCCIPQ9P287 314 aaKnown RBP eCLIP19.46■□□□□ 0.71
UBXN1-213ENST00000532904 NOVA2Q9UNW9 492 aaKnown RBP19.46■□□□□ 0.71
UBXN1-213ENST00000532904 SCAF8Q9UPN6 1271 aaKnown RBP19.46■□□□□ 0.71
UBXN1-213ENST00000532904 RSPH10B2B2RC85 870 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 RSPH10BP0C881 870 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 MUTP22033 750 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 TMOD1P28289 359 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 SMTNP53814 917 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 SETQ01105 290 aaPredicted RBP19.45■□□□□ 0.7
UBXN1-213ENST00000532904 DHX9Q08211 1270 aaKnown RBP19.45■□□□□ 0.7
UBXN1-213ENST00000532904 PPP2R5CQ13362 524 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 CEP55Q53EZ4 464 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 NBPF12Q5TAG4 269 aaPredicted RBP19.45■□□□□ 0.7
UBXN1-213ENST00000532904 CCDC13Q8IYE1 715 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 CYP2W1Q8TAV3 490 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 TXLNGYQ9BZA5 131 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 CELF4Q9BZC1 486 aaKnown RBP19.45■□□□□ 0.7
UBXN1-213ENST00000532904 ACTR5Q9H9F9 607 aaPredicted RBP19.45■□□□□ 0.7
UBXN1-213ENST00000532904 SLC38A10Q9HBR0 1119 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 PPP2R3BQ9Y5P8 575 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 DDX3YO15523 660 aaKnown RBP19.45■□□□□ 0.7
UBXN1-213ENST00000532904 EVI5O60447 810 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 PPFIA2O75334 1257 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 PSMD10O75832 226 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 GCNT3O95395 438 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 TMEM253P0C7T8 217 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 LMNB1P20700 586 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 SOX5P35711 763 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 PPATQ06203 517 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 ODF2Q5BJF6 829 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 CCDC121Q6ZUS5 278 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 SCYL3Q8IZE3 742 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 NLGN2Q8NFZ4 835 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 RFFLQ8WZ73 363 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 AS3MTQ9HBK9 375 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 RPTORQ8N122 1335 aa19.45■□□□□ 0.7
UBXN1-213ENST00000532904 CLIC2O15247 247 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 BUB1BO60566 1050 aaPredicted RBP19.44■□□□□ 0.7
UBXN1-213ENST00000532904 TBCAO75347 108 aaKnown RBP19.44■□□□□ 0.7
UBXN1-213ENST00000532904 EIF3BP55884 814 aaKnown RBP19.44■□□□□ 0.7
UBXN1-213ENST00000532904 NFIL3Q16649 462 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 OTOP1Q7RTM1 612 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 CCDC91Q7Z6B0 441 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 ATP8B4Q8TF62 1192 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 RAPGEF5Q92565 580 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 AGBL1Q96MI9 1066 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 RUSC1Q9BVN2 902 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 RAB17Q9H0T7 212 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 TUFT1Q9NNX1 390 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 A1CFQ9NQ94 594 aaKnown RBP19.44■□□□□ 0.7
UBXN1-213ENST00000532904 OLFML3Q9NRN5 406 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 PPP1R9AQ9ULJ8 1098 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 PCDHB13Q9Y5F0 798 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 LOXHD1Q8IVV2 1947 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 TGFB1I1O43294 461 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 EYA4O95677 639 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 FGGP02679 453 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 GAP43P17677 238 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 PTENP60484 403 aa19.44■□□□□ 0.7
UBXN1-213ENST00000532904 MAGOHP61326 146 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms