RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 PDLIM2Q96JY6 352 aa8.08□□□□□ -1.12
CTNND1-233ENST00000532787 PUS3Q9BZE2 481 aaKnown RBP8.08□□□□□ -1.12
CTNND1-233ENST00000532787 YIPF3Q9GZM5 350 aa8.08□□□□□ -1.12
CTNND1-233ENST00000532787 PUS7LQ9H0K6 701 aaKnown RBP8.08□□□□□ -1.12
CTNND1-233ENST00000532787 EPN3Q9H201 632 aa8.08□□□□□ -1.12
CTNND1-233ENST00000532787 GTSE1Q9NYZ3 720 aa8.08□□□□□ -1.12
CTNND1-233ENST00000532787 LOC102724428A0A0B4J2F2 783 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 COBLO75128 1261 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 FDX1P10109 184 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 SIK1P57059 783 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 PTPN12Q05209 780 aaKnown RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 POTEAQ6S8J7 498 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 RASSF3Q86WH2 238 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 ZNF280CQ8ND82 737 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 DYDC2Q96IM9 177 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 COA1Q9GZY4 146 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 OLA1Q9NTK5 396 aaKnown RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 BSDC1Q9NW68 430 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 PKD2L2Q9NZM6 624 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 ZFYVE16Q7Z3T8 1539 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 ERVK-7P63135 1459 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 MAGI2Q86UL8 1455 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 H0Y626 953 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 ZBTB5O15062 677 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 TRIM16O95361 564 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 KRT14P02533 472 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 ATP1A3P13637 1013 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 CD58P19256 250 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 PHKA2P46019 1235 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 CDK8P49336 464 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 SERPINB9P50453 376 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 RAD23BP54727 409 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 DYNLL1P63167 89 aaKnown RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 CACNB1Q02641 598 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 GRIN1Q05586 938 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 COASYQ13057 564 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 HIC1Q14526 733 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 DSTYKQ6XUX3 929 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 COA7Q96BR5 231 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 FAM161BQ96MY7 647 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 ETNK1Q9HBU6 452 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 HPCAL4Q9UM19 191 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 ZNF711Q9Y462 761 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 PITPNM2Q9BZ72 1349 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 STXBP3O00186 592 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 KCNH2Q12809 1159 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 ZBTB33Q86T24 672 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 ENAHQ8N8S7 591 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 BEST2Q8NFU1 509 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 LZICQ8WZA0 190 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 NUP85Q9BW27 656 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 KDM4CQ9H3R0 1056 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 PSD3Q9NYI0 1048 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 BFARQ9NZS9 450 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 FEM1BQ9UK73 627 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 BLOC1S6Q9UL45 172 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 TRAF3IP3Q9Y228 551 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 HEG1Q9ULI3 1381 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 GTPBP10A4D1E9 387 aaKnown RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 SPAG6O75602 509 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 SDC4P31431 198 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 GPC3P51654 580 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 PSMD7P51665 324 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 DOK7Q18PE1 504 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 ZNF699Q32M78 642 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 FAM83BQ5T0W9 1011 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 DAB2IPQ5VWQ8 1189 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 HEATR6Q6AI08 1181 aaKnown RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 SPATA21Q7Z572 469 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 PRUNE1Q86TP1 453 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 RIBC1Q8N443 379 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 C3orf20Q8ND61 904 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 INTS2Q9H0H0 1204 aaKnown RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 BHMT2Q9H2M3 363 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 USP21Q9UK80 565 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 COPG1Q9Y678 874 aaKnown RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 LOC102724159A0A0B4J2E5 919 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 MEFVO15553 781 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 MECOMQ03112 1051 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 PWP2Q15269 919 aaKnown RBP8.07□□□□□ -1.12
CTNND1-233ENST00000532787 NLRP10Q86W26 655 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 KIAA2013Q8IYS2 634 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 ULK4Q96C45 1275 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 SGSM3Q96HU1 749 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 TRIM54Q9BYV2 358 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 PARVAQ9NVD7 372 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 NSMCE4AQ9NXX6 385 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 PNMA3Q9UL41 463 aa8.07□□□□□ -1.12
CTNND1-233ENST00000532787 CD2BP2O95400 341 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 COPB2P35606 906 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 VAMP7P51809 220 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 CAPRIN1Q14444 709 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 C4orf22Q6V702 233 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 KCTD17Q8N5Z5 321 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 STRBPQ96SI9 672 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 FBXO2Q9UK22 296 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 PCDHA6Q9UN73 950 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 G3BP2Q9UN86 482 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 PCDHA8Q9Y5H6 950 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 MYO3BQ8WXR4 1341 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms