RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 FARP1Q9Y4F1 1045 aaPredicted RBP15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 NDUFA10O95299 355 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 CDC42EP1Q00587 391 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 BBS9Q3SYG4 887 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 FAM217BQ9NTX9 383 aaPredicted RBP15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 AP3M2P53677 418 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 GFPT1Q06210 699 aaPredicted RBP15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 ZNF543Q08ER8 600 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 SNAPC2Q13487 334 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 TMEM143Q96AN5 459 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 POLLQ9UGP5 575 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 FIS1Q9Y3D6 152 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 CASP2P42575 452 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 VAMP7P51809 220 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 VEPH1Q14D04 833 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 KNOP1Q1ED39 458 aaKnown RBP15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 FRMPD1Q5SYB0 1578 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 RFC1P35251 1148 aaPredicted RBP15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 KIAA1755Q5JYT7 1200 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 AFG1LQ8WV93 481 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 TMEM106CQ9BVX2 250 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 DEFB129Q9H1M3 183 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 ATP8A1Q9Y2Q0 1164 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 DYNC1LI2O43237 492 aaPredicted RBP15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 C16orf86Q6ZW13 317 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 BCAS4Q8TDM0 211 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 ZNF560Q96MR9 790 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 MEGF6O75095 1541 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 CA4P22748 312 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 USP11P51784 963 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 KCNH2Q12809 1159 aa15.79■□□□□ 0.12
PCDHA9-202ENST00000532602 NMT1P30419 496 aaKnown RBP15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 TBK1Q9UHD2 729 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 ZNF500O60304 480 aaPredicted RBP15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 BAG2O95816 211 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 TAF1BQ53T94 588 aaPredicted RBP15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 FBXO33Q7Z6M2 555 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 RNF149Q8NC42 400 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 IGDCC4Q8TDY8 1250 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 GTF3C2Q8WUA4 911 aaPredicted RBP15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 MAGEB5Q9BZ81 275 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 MAP2P11137 1827 aaKnown RBP15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 EFNA5P52803 228 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 SEMA3FQ13275 785 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 TMED2Q15363 201 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 ZNF746Q6NUN9 644 aaPredicted RBP15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 NUDT18Q6ZVK8 323 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 M0QYV0 167 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 GYS1P13807 737 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 SDC4P31431 198 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 KRT39Q6A163 491 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 SHC4Q6S5L8 630 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 LPAR1Q92633 364 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 AGBL1Q96MI9 1066 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 PRR12Q9ULL5 1215 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 PCDHA10Q9Y5I2 948 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 IQANK1A0A1B0GTG1 560 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 C19orf81C9J6K1 198 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 CCDC188H7C350 402 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 NEMP1O14524 444 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 DHX9Q08211 1270 aaKnown RBP15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 EFHD1Q9BUP0 239 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 CEP72Q9P209 647 aa15.78■□□□□ 0.12
PCDHA9-202ENST00000532602 EXOC1LA0A1B0GW35 172 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 TRIM49P0CI25 452 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 TRIM49CP0CI26 452 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 RASA1P20936 1047 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 CLNS1AP54105 237 aaKnown RBP15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 HHIPL2Q6UWX4 724 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 KIF12Q96FN5 646 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 FGD4Q96M96 766 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 HEMGNQ9BXL5 484 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 LRRC53A6NM62 1247 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 EXOSC10Q01780 885 aaKnown RBP15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 RAD51Q06609 339 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 TKFCQ3LXA3 575 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 PYROXD1Q8WU10 500 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 DEPDC1BQ8WUY9 529 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 SCG3Q8WXD2 468 aaKnown RBP15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 KLHL8Q9P2G9 620 aaPredicted RBP15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 CNOT8Q9UFF9 292 aaKnown RBP15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 AK9Q5TCS8 1911 aa15.77■□□□□ 0.12
PCDHA9-202ENST00000532602 CCL15-CCL14A0A0B4J2E2 113 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 SERPINB6P35237 376 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 SLCO1A2P46721 670 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 DR1Q01658 176 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 CACNB2Q08289 660 aaPredicted RBP15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 CCL15Q16663 113 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 SLC13A4Q9UKG4 626 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 UBE4BO95155 1302 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 CREB3O43889 395 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 UPP2O95045 317 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 TAC1P20366 129 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 STAT5BP51692 787 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 SH3BGRP55822 239 aaPredicted RBP15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 MMTAG2Q9BU76 263 aaKnown RBP15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 ANAPC7Q9UJX3 599 aa15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 PIN4Q9Y237 131 aaKnown RBP15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 ZRANB2O95218 330 aaKnown RBP eCLIP15.77■□□□□ 0.11
PCDHA9-202ENST00000532602 HUNKP57058 714 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms