RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PPP4R1Q8TF05 950 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 HEXIM2Q96MH2 286 aaKnown RBP16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 RIT2Q99578 217 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 SH2D3AQ9BRG2 576 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 DNAJC17Q9NVM6 304 aaKnown RBP16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 SLC9A2Q9UBY0 812 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 PNMA3Q9UL41 463 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 FHOD1Q9Y613 1164 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 ZNF18P17022 549 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 HMGCS2P54868 508 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 MTMR2Q13614 643 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 CATSPER3Q86XQ3 398 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 KSR1Q8IVT5 923 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 RUBCNQ92622 972 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 RAB3IPQ96QF0 476 aaPredicted RBP16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 PODXL2Q9NZ53 605 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 PSMA2P25787 234 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 EARS2Q5JPH6 523 aaKnown RBP16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 DARS2Q6PI48 645 aaKnown RBP16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 LMNTD2Q8IXW0 634 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 MKNK1Q9BUB5 465 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 AP5M1Q9H0R1 490 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 KIF1AQ12756 1690 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 CLTAP09496 248 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 CNGA1P29973 690 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 MSH2P43246 934 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 ZNF568Q3ZCX4 644 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 PDIK1LQ8N165 341 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 HEMGNQ9BXL5 484 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 CD2APQ9Y5K6 639 aa16.41■□□□□ 0.22
PCDHA3-202ENST00000532566 FAM187AA6NFU0 413 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 EVI5O60447 810 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 CYP11B2P19099 503 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 GALCP54803 685 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 ERVK-24P63145 666 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 ZNF699Q32M78 642 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 WNT8AQ9H1J5 351 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 JPH1Q9HDC5 661 aaPredicted RBP16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 HSPBP1Q9NZL4 362 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 AGO2Q9UKV8 859 aaKnown RBP16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 CALB1P05937 261 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 BAATQ14032 418 aaPredicted RBP16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 RNPC3Q96LT9 517 aaKnown RBP16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 RBAKQ9NYW8 714 aaPredicted RBP16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 EIF3DO15371 548 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 DGAT1O75907 488 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 IL1R1P14778 569 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 ARL4AP40617 200 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 BBS9Q3SYG4 887 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 CENPUQ71F23 418 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 SYT2Q8N9I0 419 aaPredicted RBP16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 ZDHHC15Q96MV8 337 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 TEX13BQ9BXU2 312 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 IL17RBQ9NRM6 502 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 HAUS2Q9NVX0 235 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 GIPC1O14908 333 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 CRCPO75575 148 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 SARSP49591 514 aaKnown RBP16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 COG2Q14746 738 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 NAB2Q15742 525 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 ZC2HC1CQ53FD0 456 aaPredicted RBP16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 MOXD1Q6UVY6 613 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 SLC10A4Q96EP9 437 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 POLR3CQ9BUI4 534 aaPredicted RBP16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 RIC1Q4ADV7 1423 aa16.4■□□□□ 0.22
PCDHA3-202ENST00000532566 CCT6BQ92526 530 aa16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 DNAJC7Q99615 494 aa16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 MXRA8Q9BRK3 442 aa16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 C2orf40Q9H1Z8 148 aa16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 SLC38A10Q9HBR0 1119 aa16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 AMACRQ9UHK6 382 aa16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 GNA15P30679 374 aa16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 NT5DC1Q5TFE4 455 aa16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 TRIM72Q6ZMU5 477 aa16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 VIPAS39Q9H9C1 493 aa16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 NGRNQ9NPE2 291 aaKnown RBP16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 CYFIP1Q7L576 1253 aa16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 NOA1Q8NC60 698 aaKnown RBP16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 SYN2Q92777 582 aaPredicted RBP16.39■□□□□ 0.21
PCDHA3-202ENST00000532566 CYP26A1O43174 497 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 PHKA2P46019 1235 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 PDE1BQ01064 536 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 FIGNQ5HY92 759 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 RSPH3Q86UC2 560 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 ZWILCHQ9H900 591 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 STRIP2Q9ULQ0 834 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 RTN2O75298 545 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 CPP00450 1065 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 NR3C2P08235 984 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 PLS3P13797 630 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 IFRD2Q12894 506 aaPredicted RBP16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 COL9A3Q14050 684 aaPredicted RBP16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 CENPPQ6IPU0 288 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 MS4A14Q96JA4 679 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 MRPL4Q9BYD3 311 aaKnown RBP16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 LRRC4Q9HBW1 653 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 UBE4BO95155 1302 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 MSH4O15457 936 aa16.38■□□□□ 0.21
PCDHA3-202ENST00000532566 XKR3Q5GH77 459 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms